RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 PRR33A8MZF0 331 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 PSMD12O00232 456 aaPredicted RBP10.76□□□□□ -0.69
USP3-218ENST00000560202 ARHGAP33O14559 1287 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 OR1F1O43749 312 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 LCMT2O60294 686 aaKnown RBP10.76□□□□□ -0.69
USP3-218ENST00000560202 UBXN7O94888 489 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 EPN2O95208 641 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 FKBP9O95302 570 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 ETHE1O95571 254 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 SERPINB1P30740 379 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 GRK3P35626 688 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 GRIA3P42263 894 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 NCALDP61601 193 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 PHEXP78562 749 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 MAD2L1Q13257 205 aaPredicted RBP10.76□□□□□ -0.69
USP3-218ENST00000560202 KIAA0040Q15053 153 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 RPS6KA2Q15349 733 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 SLC5A12Q1EHB4 618 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 IL23RQ5VWK5 629 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 ZNF425Q6IV72 752 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 ARMC6Q6NXE6 501 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 KLHL35Q6PF15 583 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 VN1R5Q7Z5H4 357 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 TRIM73Q86UV7 250 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 PLD3Q8IV08 490 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 SLC35F3Q8IY50 421 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.76□□□□□ -0.69
USP3-218ENST00000560202 MIER2Q8N344 545 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 ANKRD53Q8N9V6 530 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 RSC1A1Q92681 617 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 APIPQ96GX9 242 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 SDR39U1Q9NRG7 319 aaPredicted RBP10.76□□□□□ -0.69
USP3-218ENST00000560202 TXLNGQ9NUQ3 528 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 NLGN3Q9NZ94 848 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 TAGLN3Q9UI15 199 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 EIF3LQ9Y262 564 aaKnown RBP10.76□□□□□ -0.69
USP3-218ENST00000560202 KLHL20Q9Y2M5 609 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 RNF215Q9Y6U7 377 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 R4GN57 208 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 KNL1Q8NG31 2342 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 HAT1O14929 419 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 TNFSF14O43557 240 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 NRP2O60462 931 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 UNC5CO95185 931 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 TGFB1P01137 390 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 LMNAP02545 664 aaKnown RBP10.76□□□□□ -0.69
USP3-218ENST00000560202 SYPP08247 313 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 ESRRAP11474 423 aaPredicted RBP10.76□□□□□ -0.69
USP3-218ENST00000560202 CD1EP15812 388 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 AMD1P17707 334 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 GPX3P22352 226 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 CALB2P22676 271 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 PRDX6P30041 224 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 MPLP40238 635 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 MRPL19P49406 292 aaKnown RBP10.76□□□□□ -0.69
USP3-218ENST00000560202 CCT8P50990 548 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 RPS6KA3P51812 740 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 PAOXQ6QHF9 649 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 SPESP1Q6UW49 350 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 ZNF438Q7Z4V0 828 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 PAQR7Q86WK9 346 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 TBC1D19Q8N5T2 526 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 KLHL29Q96CT2 875 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 CMTM5Q96DZ9 223 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 DUSP23Q9BVJ7 150 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 SARGQ9BW04 601 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 BRINP2Q9C0B6 783 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 ARRDC1-AS1Q9H2J1 176 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 NMRK1Q9NWW6 199 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 ASIC5Q9NY37 505 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 LRIT1Q9P2V4 623 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 PPT2Q9UMR5 302 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 TMED5Q9Y3A6 229 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 POLR3HQ9Y535 204 aaPredicted RBP10.76□□□□□ -0.69
USP3-218ENST00000560202 PCDHGA5Q9Y5G8 931 aa10.76□□□□□ -0.69
USP3-218ENST00000560202 TDRD6O60522 2096 aaKnown RBP10.75□□□□□ -0.69
USP3-218ENST00000560202 ARHGEF17Q96PE2 2063 aaPredicted RBP10.75□□□□□ -0.69
USP3-218ENST00000560202 SDK1Q7Z5N4 2213 aa10.75□□□□□ -0.69
USP3-218ENST00000560202 LOC100653049A0A140TA62 436 aa10.75□□□□□ -0.69
USP3-218ENST00000560202 PDLIM1O00151 329 aa10.75□□□□□ -0.69
USP3-218ENST00000560202 TRIM38O00635 465 aa10.75□□□□□ -0.69
USP3-218ENST00000560202 ZW10O43264 779 aa10.75□□□□□ -0.69
USP3-218ENST00000560202 NUDT21O43809 227 aaKnown RBP10.75□□□□□ -0.69
USP3-218ENST00000560202 SH3BGRLO75368 114 aa10.75□□□□□ -0.69
USP3-218ENST00000560202 KRT34O76011 436 aa10.75□□□□□ -0.69
USP3-218ENST00000560202 CER1O95813 267 aa10.75□□□□□ -0.69
USP3-218ENST00000560202 PROS1P07225 676 aa10.75□□□□□ -0.69
USP3-218ENST00000560202 ALPPL2P10696 532 aa10.75□□□□□ -0.69
USP3-218ENST00000560202 THRAP10827 490 aa10.75□□□□□ -0.69
USP3-218ENST00000560202 G6PDP11413 515 aa10.75□□□□□ -0.69
USP3-218ENST00000560202 COX4I1P13073 169 aa10.75□□□□□ -0.69
USP3-218ENST00000560202 GLB1P16278 677 aa10.75□□□□□ -0.69
USP3-218ENST00000560202 MAGP20916 626 aa10.75□□□□□ -0.69
USP3-218ENST00000560202 PTX3P26022 381 aaPredicted RBP10.75□□□□□ -0.69
USP3-218ENST00000560202 BCL6P41182 706 aa10.75□□□□□ -0.69
USP3-218ENST00000560202 ACADVLP49748 655 aa10.75□□□□□ -0.69
USP3-218ENST00000560202 EPHA4P54764 986 aa10.75□□□□□ -0.69
USP3-218ENST00000560202 NME5P56597 212 aa10.75□□□□□ -0.69
USP3-218ENST00000560202 PPP1CAP62136 330 aa10.75□□□□□ -0.69
USP3-218ENST00000560202 CYP4F2P78329 520 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms