RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 KRT222Q8N1A0 295 aa12.05□□□□□ -0.48
RABGGTA-213ENST00000560127 ARSGQ96EG1 525 aa12.05□□□□□ -0.48
RABGGTA-213ENST00000560127 SPATA13Q96N96 652 aa12.05□□□□□ -0.48
RABGGTA-213ENST00000560127 OR2A5Q96R48 311 aa12.05□□□□□ -0.48
RABGGTA-213ENST00000560127 BAG1Q99933 345 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-213ENST00000560127 PLCD4Q9BRC7 762 aa12.05□□□□□ -0.48
RABGGTA-213ENST00000560127 GPATCH1Q9BRR8 931 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-213ENST00000560127 ACAT2Q9BWD1 397 aa12.05□□□□□ -0.48
RABGGTA-213ENST00000560127 CARD6Q9BX69 1037 aa12.05□□□□□ -0.48
RABGGTA-213ENST00000560127 HEMGNQ9BXL5 484 aa12.05□□□□□ -0.48
RABGGTA-213ENST00000560127 TP63Q9H3D4 680 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-213ENST00000560127 C19orf25Q9UFG5 118 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-213ENST00000560127 TTC7AQ9ULT0 858 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-213ENST00000560127 RUVBL2Q9Y230 463 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-213ENST00000560127 F8W8V4 182 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 TFECO14948 347 aaPredicted RBP12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 PJA2O43164 708 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 PHF2O75151 1096 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 TFEBP19484 476 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 RFC3P40938 356 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 MEOX1P50221 254 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 PMPCAQ10713 525 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 FAM53BQ14153 422 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 SEMA3AQ14563 771 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 NAA25Q14CX7 972 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 MFSD4BQ5TF39 518 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 TTC23LQ6PF05 361 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 ZZZ3Q8IYH5 903 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 KATNAL2Q8IYT4 538 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 RCOR2Q8IZ40 523 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 LGI4Q8N135 537 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 RAB42Q8N4Z0 105 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 SLC5A8Q8N695 610 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 WFDC11Q8NEX6 87 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 OR13J1Q8NGT2 312 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 OR9A4Q8NGU2 314 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 ACTL9Q8TC94 416 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 MBD6Q96DN6 1003 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 RMND5BQ96G75 393 aaPredicted RBP12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 PPP1R2P1Q96PQ5 205 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 ALS2CR12Q96Q35 445 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 CDCP1Q9H5V8 836 aa12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 ANK3Q12955 4377 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-213ENST00000560127 USP27XA6NNY8 438 aa12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 HS6ST1O60243 411 aa12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 CDC40O60508 579 aaKnown RBP eCLIP12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 GOT2P00505 430 aaKnown RBP12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 TPP2P29144 1249 aaPredicted RBP12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 CYLC1P35663 651 aaPredicted RBP12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 NR0B1P51843 470 aaKnown RBP12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 DGKQP52824 942 aa12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 CCDC38Q502W7 563 aa12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 CMPK2Q5EBM0 449 aa12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 ZNF425Q6IV72 752 aa12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 C11orf63Q6NUN7 778 aa12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 PAPD4Q6PIY7 484 aaKnown RBP12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 PRSS41Q7RTY9 318 aa12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 RPS19BP1Q86WX3 136 aaKnown RBP12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 CDKL3Q8IVW4 592 aaPredicted RBP12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 LRRC57Q8N9N7 239 aa12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 POGLUT1Q8NBL1 392 aa12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 KRT35Q92764 455 aa12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 RERGQ96A58 199 aaPredicted RBP12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 LRRC45Q96CN5 670 aa12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 FAM118BQ9BPY3 351 aa12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 FERMT1Q9BQL6 677 aa12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 TSSK1BQ9BXA7 367 aa12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 CLEC4MQ9H2X3 399 aaPredicted RBP12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 TRIM45Q9H8W5 580 aaPredicted RBP12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 MRPS30Q9NP92 439 aaKnown RBP12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 PLSCR2Q9NRY7 297 aa12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 RASSF1Q9NS23 344 aa12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 SPATA7Q9P0W8 599 aa12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 R3HDM2Q9Y2K5 976 aaKnown RBP12.03□□□□□ -0.48
RABGGTA-213ENST00000560127 BTNL10A8MVZ5 291 aa12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 H0YIG0 161 aa12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 CDK2AP1O14519 115 aa12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 NDC80O14777 642 aa12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 STK10O94804 968 aaKnown RBP12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 RBP3P10745 1247 aa12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 AVPR1BP47901 424 aa12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 CYB561P49447 251 aa12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 AGTR2P50052 363 aa12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 TAS2R50P59544 299 aa12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 EIF3EP60228 445 aaKnown RBP12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 CCZ1BP86790 482 aa12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 CCZ1P86791 482 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 PTK6Q13882 451 aa12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 USP10Q14694 798 aaKnown RBP12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 TMED2Q15363 201 aa12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 SFT2D3Q587I9 215 aa12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 SUSD1Q6UWL2 747 aa12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 ZNF534Q76KX8 674 aa12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 OR51Q1Q8NH59 317 aa12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 C18orf12Q96KH6 178 aa12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 PWWP2AQ96N64 755 aa12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 HCN3Q9P1Z3 774 aa12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 SLC2A6Q9UGQ3 507 aa12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 PCYOX1Q9UHG3 505 aa12.02□□□□□ -0.49
RABGGTA-213ENST00000560127 ALG6Q9Y672 507 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms