RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 NTRK3Q16288 839 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 MOGQ16653 247 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 CCDC71LQ8N9Z2 235 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 SLC13A3Q8WWT9 602 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 LGMNQ99538 433 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 DPEP2Q9H4A9 486 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 RPS10P5Q9NQ39 176 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 UBE2J1Q9Y385 318 aaPredicted RBP13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 NUP153P49790 1475 aaKnown RBP13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 SYNGR4O95473 234 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 FUT4P22083 530 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 CERS1P27544 350 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 MRPS5P82675 430 aaKnown RBP13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 DYRK1AQ13627 763 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 LRP8Q14114 963 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 DPYSL2Q16555 572 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 FAM122CQ6P4D5 195 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 FAM198BQ6UWH4 519 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 LGI4Q8N135 537 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 MSI2Q96DH6 328 aaKnown RBP13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 BTN2A3PQ96KV6 586 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 WRAP53Q9BUR4 548 aaKnown RBP13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 CEMIPQ8WUJ3 1361 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 A0A1B0GVT2 93 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 NT5C1B-RDH14C9J2C7 533 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 CYB5BO43169 146 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 OR2B3O76000 313 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 ETFAP13804 333 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 PTPRAP18433 802 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 ENDOUP21128 410 aaKnown RBP13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 EEF1A1P68104 462 aaKnown RBP13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 RHDQ02161 417 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 ST3GAL3Q11203 375 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 NFIXQ14938 502 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 EEF1A1P5Q5VTE0 462 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 FTMTQ8N4E7 242 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 FIBCD1Q8N539 461 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 KCT2Q8NC54 265 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 ZNF675Q8TD23 568 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 VRK1Q99986 396 aaPredicted RBP13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 CACNA1FO60840 1977 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 RIC1Q4ADV7 1423 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 IQCF5A8MTL0 148 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 MPPED1O15442 326 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 PI15O43692 258 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 RGS9O75916 674 aaPredicted RBP13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 C2P06681 752 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 ERCC1P07992 297 aaPredicted RBP13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 GNSP15586 552 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 CHRNB2P17787 502 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 MAOAP21397 527 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 TGFB2P61812 414 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 HNRNPKP61978 463 aaKnown RBP eCLIP13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 TMEM35AQ53FP2 167 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 PIGGQ5H8A4 983 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 TMEM164Q5U3C3 297 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 CRTC1Q6UUV9 634 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 ARL6Q9H0F7 186 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 REV1Q9UBZ9 1251 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 A8MV72 311 aaPredicted RBP13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 FRKP42685 505 aaPredicted RBP13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 RARRES1P49788 294 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 MTPNP58546 118 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 FOXK1P85037 733 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 PPA1Q15181 289 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 FCRL2Q96LA5 508 aaPredicted RBP13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 URM1Q9BTM9 101 aaKnown RBP13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 MEAF6Q9HAF1 191 aa13.48□□□□□ -0.25
CSPG4P12-202ENST00000559989 A0A1W2PRB8 838 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 S1PR1P21453 382 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 GK2Q14410 553 aaPredicted RBP13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 GTPBP8Q8N3Z3 284 aaPredicted RBP13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 POTEKPQ9BYX7 375 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 ABHD16BQ9H3Z7 469 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 NMUR1Q9HB89 426 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 HMX1Q9NP08 348 aaPredicted RBP13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 PCDHB14Q9Y5E9 798 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 NDST3O95803 873 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 MATN1P21941 496 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 SLC6A6P31641 620 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 ZNF84P51523 738 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 TAS2R20P59543 309 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 ODF4Q2M2E3 257 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 UGT2A3Q6UWM9 527 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 WDR53Q7Z5U6 358 aaPredicted RBP13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 FANK1Q8TC84 345 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 COL21A1Q96P44 957 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 OSBPL7Q9BZF2 842 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 DNAJB4Q9UDY4 337 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 RNF13O43567 381 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 PCDH7O60245 1069 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 HTR2BP41595 481 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 CDKN1CP49918 316 aaPredicted RBP13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 MRPS6P82932 125 aaKnown RBP13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 IRF5Q13568 498 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 TMPPEQ6ZT21 453 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 CFAP52Q8N1V2 620 aa13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 AURKBQ96GD4 344 aaPredicted RBP13.47□□□□□ -0.25
CSPG4P12-202ENST00000559989 IL4I1Q96RQ9 567 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms