RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 C3orf38Q5JPI3 329 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 CYB5D1Q6P9G0 228 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 TMPRSS7Q7RTY8 843 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 GPR135Q8IZ08 494 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 OR4N4Q8N0Y3 316 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 CDYL2Q8N8U2 506 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 L3MBTL4Q8NA19 623 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 MFSD9Q8NBP5 474 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 WDR36Q8NI36 951 aaKnown RBP13.73□□□□□ -0.21
SMAD6-204ENST00000559931 ZNF75CPQ92670 426 aaPredicted RBP13.73□□□□□ -0.21
SMAD6-204ENST00000559931 REPS1Q96D71 796 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 MTFMTQ96DP5 389 aaKnown RBP13.73□□□□□ -0.21
SMAD6-204ENST00000559931 THAP11Q96EK4 314 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 WDR34Q96EX3 536 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 LIN37Q96GY3 246 aaPredicted RBP13.73□□□□□ -0.21
SMAD6-204ENST00000559931 NLNQ9BYT8 704 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 PITHD1Q9GZP4 211 aaPredicted RBP13.73□□□□□ -0.21
SMAD6-204ENST00000559931 CHRNA10Q9GZZ6 450 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 SPNS1Q9H2V7 528 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 NT5DC2Q9H857 520 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 PISDQ9UG56 409 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 PILRAQ9UKJ1 303 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 RARRES3Q9UL19 164 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 FIS1Q9Y3D6 152 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 PCDHGA11Q9Y5H2 935 aa13.73□□□□□ -0.21
SMAD6-204ENST00000559931 COL27A1Q8IZC6 1860 aaPredicted RBP13.72□□□□□ -0.21
SMAD6-204ENST00000559931 A0A1B0GTL3 188 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 UBFD1O14562 309 aaKnown RBP13.72□□□□□ -0.21
SMAD6-204ENST00000559931 PLD2O14939 933 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 POLR1CO15160 346 aaPredicted RBP13.72□□□□□ -0.21
SMAD6-204ENST00000559931 ITM2AO43736 263 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 HYAL3O43820 417 aaPredicted RBP13.72□□□□□ -0.21
SMAD6-204ENST00000559931 LYPLA1O75608 230 aaPredicted RBP13.72□□□□□ -0.21
SMAD6-204ENST00000559931 OR2B3O76000 313 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 ESRRBO95718 433 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 ENO1P06733 434 aaKnown RBP13.72□□□□□ -0.21
SMAD6-204ENST00000559931 CAPN1P07384 714 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 CHRNGP07510 517 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 SPINK2P20155 84 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 CD22P20273 847 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 SCTRP47872 440 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 CYP4F2P78329 520 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 PHEXP78562 749 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 MC2RQ01718 297 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 BST1Q10588 318 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 IFT88Q13099 833 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 EIF3IQ13347 325 aaKnown RBP13.72□□□□□ -0.21
SMAD6-204ENST00000559931 WASHC2DQ5SRD0 308 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 FRMPD2BQ6IN97 320 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 LETMD1Q6P1Q0 360 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 RNF44Q7L0R7 432 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 ERMP1Q7Z2K6 904 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 CUZD1Q86UP6 607 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 LSMEM2Q8N112 164 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 ZNF655Q8N720 491 aaPredicted RBP13.72□□□□□ -0.21
SMAD6-204ENST00000559931 TTLQ8NG68 377 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 RAB3IL1Q8TBN0 382 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 AGR3Q8TD06 166 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 AGAP11Q8TF27 550 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 SLC13A3Q8WWT9 602 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 CTRCQ99895 268 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 SLC7A5P2Q9GIP4 190 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 SPRTNQ9H040 489 aaPredicted RBP13.72□□□□□ -0.21
SMAD6-204ENST00000559931 ILKAPQ9H0C8 392 aaPredicted RBP13.72□□□□□ -0.21
SMAD6-204ENST00000559931 ELOVL6Q9H5J4 265 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 STARD5Q9NSY2 213 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 TRPS1Q9UHF7 1281 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 ZNF490Q9ULM2 529 aaPredicted RBP13.72□□□□□ -0.21
SMAD6-204ENST00000559931 SNX6Q9UNH7 406 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 SATB2Q9UPW6 733 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 PCDHGA4Q9Y5G9 962 aa13.72□□□□□ -0.21
SMAD6-204ENST00000559931 KCNE1BA0A087WTH5 132 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 B4E171 279 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 HCRTR1O43613 425 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 KRT6AP02538 564 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 KRT6BP04259 564 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 ITIH1P19827 911 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 AHRP35869 848 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 TSPAN7P41732 249 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 KRT6CP48668 564 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 NEK2P51955 445 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 ITGA1P56199 1179 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 IL11RAQ14626 422 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 TCTE1Q5JU00 501 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 SH2D4BQ5SQS7 431 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 TMEM164Q5U3C3 297 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 ASPGQ86U10 573 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 BPHLQ86WA6 291 aaPredicted RBP13.71□□□□□ -0.21
SMAD6-204ENST00000559931 PPP1R3BQ86XI6 285 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 CSNK1A1LQ8N752 337 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 CAMKVQ8NCB2 501 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 TRPV3Q8NET8 790 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 OR7G3Q8NG95 312 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 OR6Y1Q8NGX8 325 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 OR1L3Q8NH93 324 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 CKAP2Q8WWK9 683 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 PRR11Q96HE9 360 aaPredicted RBP13.71□□□□□ -0.21
SMAD6-204ENST00000559931 MAGEB18Q96M61 343 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 OR2A5Q96R48 311 aa13.71□□□□□ -0.21
SMAD6-204ENST00000559931 MACROD1Q9BQ69 325 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms