RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 LIX1Q8N485 282 aa10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 MARVELD2Q8N4S9 558 aa10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 OR4A15Q8NGL6 344 aa10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 WDR48Q8TAF3 677 aa10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 OR51B5Q9H339 312 aa10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 EHD3Q9NZN3 535 aa10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 H2AFY2Q9P0M6 372 aaPredicted RBP10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 B3GALT2O43825 422 aa10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 CCNKO75909 580 aa10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 SLC35E2BP0CK96 405 aa10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 SLC7A1P30825 629 aa10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 CENPAP49450 140 aa10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 MERTKQ12866 999 aa10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 CCNIQ14094 377 aa10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 REP15Q6BDI9 236 aa10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 CPSF7Q8N684 471 aaKnown RBP10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 TEX26Q8N6G2 289 aa10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 CAMKVQ8NCB2 501 aa10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 TTLQ8NG68 377 aa10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 CANT1Q8WVQ1 401 aa10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 SLC5A11Q8WWX8 675 aa10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 CNPPD1Q9BV87 410 aa10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 TBCCD1Q9NVR7 557 aa10.32□□□□□ -0.76
CARMIL3-202ENST00000559694 FOXD2O60548 495 aaPredicted RBP10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 DNAJA2O60884 412 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 AK4P27144 223 aaPredicted RBP10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 CD38P28907 300 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 GGT5P36269 586 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 YAP1P46937 504 aaKnown RBP10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 AVPR1BP47901 424 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 CSNK1EP49674 416 aaKnown RBP10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 DUSP3P51452 185 aaPredicted RBP10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 POLR2JP52435 117 aaKnown RBP10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 SLC16A1P53985 500 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 RAB14P61106 215 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 PNCKQ6P2M8 343 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 ZNF549Q6P9A3 640 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 GOLGA7Q7Z5G4 137 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 THAP5Q7Z6K1 395 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 PDPRQ8NCN5 879 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 ADAMTS15Q8TE58 950 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 SLC9A6Q92581 669 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 DNASE1L2Q92874 299 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 CD244Q9BZW8 370 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 RNF11Q9Y3C5 154 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 OR52A4PA6NMU1 304 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 E7ENX8 843 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 ATXN1LP0C7T5 689 aaKnown RBP10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 PRPS2P11908 318 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 CTSCP53634 463 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 RPS14P62263 151 aaKnown RBP10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 RAB2BQ8WUD1 216 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 UHRF1Q96T88 793 aaPredicted RBP10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 NDC1Q9BTX1 674 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 POPDC3Q9HBV1 291 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 SEMA3GQ9NS98 782 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 TET1Q8NFU7 2136 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 HNRNPCL2B2RXH8 293 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 PCDH7O60245 1069 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 CDK3Q00526 305 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 HHEXQ03014 270 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 SP140Q13342 867 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 IRF4Q15306 451 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 FGD3Q5JSP0 725 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 CENPSQ8N2Z9 138 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 C1orf52Q8N6N3 182 aaKnown RBP10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 FBXO15Q8NCQ5 510 aaPredicted RBP10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 OLIG1Q8TAK6 271 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 PHF21AQ96BD5 680 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 ASB9Q96DX5 294 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 VMP1Q96GC9 406 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 TGM7Q96PF1 710 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 MVB12BQ9H7P6 319 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 STMN3Q9NZ72 180 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 CDC14AQ9UNH5 594 aa10.31□□□□□ -0.76
CARMIL3-202ENST00000559694 EFCAB10A6NFE3 127 aa10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 EI24O14681 340 aa10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 GBAP04062 536 aa10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 CD1DP15813 335 aa10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 SRP54P61011 504 aaKnown RBP10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 COPZ1P61923 177 aa10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 HSPB3Q12988 150 aa10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 PDZK1Q5T2W1 519 aa10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 ADIPOR2Q86V24 386 aa10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 MOCOSQ96EN8 888 aa10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 MSANTD3Q96H12 275 aa10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 SERTAD3Q9UJW9 196 aa10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 RIMKLBQ9ULI2 386 aa10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 GMPPBQ9Y5P6 360 aa10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 U3KQV3 271 aa10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 ATG2BQ96BY7 2078 aa10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 TNFRSF21O75509 655 aa10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 AQP1P29972 269 aa10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 CAPGP40121 348 aa10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 DLX2Q07687 328 aaPredicted RBP10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 FAAH2Q6GMR7 532 aa10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 THOC7Q6I9Y2 204 aaKnown RBP10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 CYP4V2Q6ZWL3 525 aaPredicted RBP10.3□□□□□ -0.76
CARMIL3-202ENST00000559694 AMIGO1Q86WK6 493 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms