RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 SLCO4C1Q6ZQN7 724 aa17.82■□□□□ 0.44
CASC4-209ENST00000559222 CYP4X1Q8N118 509 aa17.82■□□□□ 0.44
CASC4-209ENST00000559222 SNX31Q8N9S9 440 aa17.82■□□□□ 0.44
CASC4-209ENST00000559222 ANKRD53Q8N9V6 530 aa17.82■□□□□ 0.44
CASC4-209ENST00000559222 MFSD9Q8NBP5 474 aa17.82■□□□□ 0.44
CASC4-209ENST00000559222 EXTL1Q92935 676 aa17.82■□□□□ 0.44
CASC4-209ENST00000559222 PARD6BQ9BYG5 372 aa17.82■□□□□ 0.44
CASC4-209ENST00000559222 DNAJC11Q9NVH1 559 aa17.82■□□□□ 0.44
CASC4-209ENST00000559222 CPSF2Q9P2I0 782 aaKnown RBP17.82■□□□□ 0.44
CASC4-209ENST00000559222 PSMC3IPQ9P2W1 217 aaPredicted RBP17.82■□□□□ 0.44
CASC4-209ENST00000559222 XPR1Q9UBH6 696 aa17.82■□□□□ 0.44
CASC4-209ENST00000559222 CTSFQ9UBX1 484 aa17.82■□□□□ 0.44
CASC4-209ENST00000559222 NUP210LQ5VU65 1888 aa17.82■□□□□ 0.44
CASC4-209ENST00000559222 A0A1W2PPM1 405 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 CDC14CA4D256 554 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 GOLGA8RI6L899 631 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 TK2O00142 265 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 OR1F1O43749 312 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 KLF7O75840 302 aaPredicted RBP17.81■□□□□ 0.44
CASC4-209ENST00000559222 B3GALT4O96024 378 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 S100BP04271 92 aaPredicted RBP17.81■□□□□ 0.44
CASC4-209ENST00000559222 RAB40ALP0C0E4 278 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 SBK3P0C264 359 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 CD22P20273 847 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 AGXTP21549 392 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 ARSFP54793 590 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 CDC16Q13042 620 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 ACAP2Q15057 778 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 LINC00303Q3SY05 128 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 CDKL4Q5MAI5 379 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 FAM219BQ5XKK7 198 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 TIFABQ6ZNK6 161 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 CCDC91Q7Z6B0 441 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 TCAIMQ8N3R3 496 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 ZSCAN1Q8NBB4 408 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 KCT2Q8NC54 265 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 RHEBL1Q8TAI7 183 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 ZCCHC10Q8TBK6 192 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 UBTD2Q8WUN7 234 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 RERGQ96A58 199 aaPredicted RBP17.81■□□□□ 0.44
CASC4-209ENST00000559222 TM4SF19Q96DZ7 209 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 NLNQ9BYT8 704 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 CD244Q9BZW8 370 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 AICDAQ9GZX7 198 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 PELI2Q9HAT8 420 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 IFT80Q9P2H3 777 aaPredicted RBP17.81■□□□□ 0.44
CASC4-209ENST00000559222 FETUBQ9UGM5 382 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 KCND3Q9UK17 655 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 TCFL5Q9UL49 500 aa17.81■□□□□ 0.44
CASC4-209ENST00000559222 KCNE1BA0A087WTH5 132 aa17.8■□□□□ 0.44
CASC4-209ENST00000559222 A0A0A6YYC8 382 aaPredicted RBP17.8■□□□□ 0.44
CASC4-209ENST00000559222 TRBC2A0A5B9 178 aa17.8■□□□□ 0.44
CASC4-209ENST00000559222 C4orf51C9J302 202 aa17.8■□□□□ 0.44
CASC4-209ENST00000559222 I3L1I5 382 aaPredicted RBP17.8■□□□□ 0.44
CASC4-209ENST00000559222 MAP2K7O14733 419 aa17.8■□□□□ 0.44
CASC4-209ENST00000559222 STK16O75716 305 aa17.8■□□□□ 0.44
CASC4-209ENST00000559222 SIX3O95343 332 aaPredicted RBP17.8■□□□□ 0.44
CASC4-209ENST00000559222 SCTRP47872 440 aa17.8■□□□□ 0.44
CASC4-209ENST00000559222 SLBPQ14493 270 aaKnown RBP eCLIP17.8■□□□□ 0.44
CASC4-209ENST00000559222 SETDB1Q15047 1291 aa17.8■□□□□ 0.44
CASC4-209ENST00000559222 TBR1Q16650 682 aa17.8■□□□□ 0.44
CASC4-209ENST00000559222 PFKFB4Q16877 469 aa17.8■□□□□ 0.44
CASC4-209ENST00000559222 SYT16Q17RD7 645 aa17.8■□□□□ 0.44
CASC4-209ENST00000559222 MRPL14Q6P1L8 145 aaKnown RBP17.8■□□□□ 0.44
CASC4-209ENST00000559222 SHISA6Q6ZSJ9 500 aa17.8■□□□□ 0.44
CASC4-209ENST00000559222 ASPGQ86U10 573 aa17.8■□□□□ 0.44
CASC4-209ENST00000559222 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.8■□□□□ 0.446e-13■■■■■ 112.3
CASC4-209ENST00000559222 SCYL1Q96KG9 808 aa17.8■□□□□ 0.44
CASC4-209ENST00000559222 DPH2Q9BQC3 489 aaPredicted RBP17.8■□□□□ 0.44
CASC4-209ENST00000559222 MESP1Q9BRJ9 268 aa17.8■□□□□ 0.44
CASC4-209ENST00000559222 EFHD1Q9BUP0 239 aa17.8■□□□□ 0.44
CASC4-209ENST00000559222 GEMIN8Q9NWZ8 242 aaKnown RBP17.8■□□□□ 0.44
CASC4-209ENST00000559222 KCNE2Q9Y6J6 123 aa17.8■□□□□ 0.44
CASC4-209ENST00000559222 C9J4A7 227 aa17.79■□□□□ 0.44
CASC4-209ENST00000559222 KLK8O60259 260 aa17.79■□□□□ 0.44
CASC4-209ENST00000559222 IPO13O94829 963 aaKnown RBP17.79■□□□□ 0.44
CASC4-209ENST00000559222 C1GALT1C1LP0DN25 315 aa17.79■□□□□ 0.44
CASC4-209ENST00000559222 RPS15P62841 145 aaKnown RBP17.79■□□□□ 0.44
CASC4-209ENST00000559222 PDK4Q16654 411 aa17.79■□□□□ 0.44
CASC4-209ENST00000559222 MUM1Q2TAK8 710 aa17.79■□□□□ 0.44
CASC4-209ENST00000559222 DEFB109BQ30KR1 87 aa17.79■□□□□ 0.44
CASC4-209ENST00000559222 YOD1Q5VVQ6 348 aaPredicted RBP17.79■□□□□ 0.44
CASC4-209ENST00000559222 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.79■□□□□ 0.44
CASC4-209ENST00000559222 TMEM151AQ8N4L1 468 aa17.79■□□□□ 0.44
CASC4-209ENST00000559222 AMER3Q8N944 861 aa17.79■□□□□ 0.44
CASC4-209ENST00000559222 ADAMTS17Q8TE56 1095 aa17.79■□□□□ 0.44
CASC4-209ENST00000559222 SARGQ9BW04 601 aa17.79■□□□□ 0.44
CASC4-209ENST00000559222 GPR87Q9BY21 358 aa17.79■□□□□ 0.44
CASC4-209ENST00000559222 TMEM216Q9P0N5 145 aa17.79■□□□□ 0.44
CASC4-209ENST00000559222 ATMQ13315 3056 aa17.79■□□□□ 0.44
CASC4-209ENST00000559222 NDUFS4O43181 175 aa17.78■□□□□ 0.44
CASC4-209ENST00000559222 ONECUT2O95948 504 aa17.78■□□□□ 0.44
CASC4-209ENST00000559222 UMODP07911 640 aa17.78■□□□□ 0.44
CASC4-209ENST00000559222 GFAPP14136 432 aa17.78■□□□□ 0.44
CASC4-209ENST00000559222 IL1RNP18510 177 aa17.78■□□□□ 0.44
CASC4-209ENST00000559222 MAT1AQ00266 395 aaKnown RBP17.78■□□□□ 0.44
CASC4-209ENST00000559222 HYAL2Q12891 473 aa17.78■□□□□ 0.44
CASC4-209ENST00000559222 DOC2AQ14183 400 aa17.78■□□□□ 0.44
CASC4-209ENST00000559222 RBBP5Q15291 538 aaKnown RBP17.78■□□□□ 0.44
CASC4-209ENST00000559222 FAM214AQ32MH5 1076 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms