RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ENOSF1Q7L5Y1 443 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 ZNF589Q86UQ0 364 aaPredicted RBP5.59□□□□□ -1.51
RTF1-204ENST00000558117 ZSCAN30Q86W11 494 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 SFTPA2Q8IWL1 248 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 CCDC13Q8IYE1 715 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 CLIP4Q8N3C7 705 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 SRBD1Q8N5C6 995 aaKnown RBP5.59□□□□□ -1.51
RTF1-204ENST00000558117 NDRG1Q92597 394 aaKnown RBP5.59□□□□□ -1.51
RTF1-204ENST00000558117 FRAT1Q92837 279 aaPredicted RBP5.59□□□□□ -1.51
RTF1-204ENST00000558117 C18orf25Q96B23 403 aaPredicted RBP5.59□□□□□ -1.51
RTF1-204ENST00000558117 CEP170P1Q96L14 293 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 KLHL15Q96M94 604 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 RIT2Q99578 217 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 LZTS2Q9BRK4 669 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 SLC38A7Q9NVC3 462 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 PPP1R14DQ9NXH3 145 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 OR6C3Q9NZP0 311 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 NAALADL1Q9UQQ1 740 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 OBSL1O75147 1896 aa5.59□□□□□ -1.51
RTF1-204ENST00000558117 ZNF106Q9H2Y7 1883 aaKnown RBP5.59□□□□□ -1.51
RTF1-204ENST00000558117 EME2A4GXA9 379 aaPredicted RBP5.58□□□□□ -1.52
RTF1-204ENST00000558117 PGPEP1LA6NFU8 196 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 LDLRAD4O15165 306 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 MSH4O15457 936 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 PLEKHA8P1O95397 391 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 F9P00740 461 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 ZNF12P17014 697 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 GLRA2P23416 452 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 POU1F1P28069 291 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 HSPA4P34932 840 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 RPL3P39023 403 aaKnown RBP5.58□□□□□ -1.52
RTF1-204ENST00000558117 PAFAH1B1P43034 410 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 SLC7A9P82251 487 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 PTP4A2Q12974 167 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 KEAP1Q14145 624 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 DEFB109BQ30KR1 87 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 NADK2Q4G0N4 442 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 SDHAF4Q5VUM1 108 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 TYW3Q6IPR3 259 aaKnown RBP5.58□□□□□ -1.52
RTF1-204ENST00000558117 ARMCX5Q6P1M9 558 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 GUSBP11Q6P575 273 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 MIER3Q7Z3K6 550 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 BIVMQ86UB2 503 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 TMEM25Q86YD3 366 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 ADGRF2Q8IZF7 708 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 SCFD1Q8WVM8 642 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 ERGIC1Q969X5 290 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 ZUFSPQ96AP4 578 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 CENPTQ96BT3 561 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 C7orf26Q96N11 449 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 SMR3AQ99954 134 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 SLC25A33Q9BSK2 321 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 TRIM9Q9C026 710 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 LHX5Q9H2C1 402 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 CXXC4Q9H2H0 198 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 RPF1Q9H9Y2 349 aaKnown RBP5.58□□□□□ -1.52
RTF1-204ENST00000558117 THAP10Q9P2Z0 257 aaPredicted RBP5.58□□□□□ -1.52
RTF1-204ENST00000558117 UXTQ9UBK9 157 aaPredicted RBP5.58□□□□□ -1.52
RTF1-204ENST00000558117 GIMAP2Q9UG22 337 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 PISDQ9UG56 409 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 AGO1Q9UL18 857 aaKnown RBP5.58□□□□□ -1.52
RTF1-204ENST00000558117 CARD8Q9Y2G2 431 aa5.58□□□□□ -1.52
RTF1-204ENST00000558117 MAGED1Q9Y5V3 778 aaPredicted RBP5.58□□□□□ -1.52
RTF1-204ENST00000558117 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.57□□□□□ -1.52
RTF1-204ENST00000558117 A0A0D9SFI3 127 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 NPIPB11E5RHQ5 1161 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 MKRN2OSH3BPM6 223 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 EDIL3O43854 480 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 ZG16O60844 167 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 PSMD10O75832 226 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 EDN1P05305 212 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 CISD3P0C7P0 127 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 PRKAR1AP10644 381 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 PCNAP12004 261 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 COX6B1P14854 86 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 KCNE1P15382 129 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 ITIH1P19827 911 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 TYMPP19971 482 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 CD82P27701 267 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 OAS2P29728 719 aaKnown RBP5.57□□□□□ -1.52
RTF1-204ENST00000558117 ARL2P36404 184 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 ETV5P41161 510 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 UBA7P41226 1012 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 DRG2P55039 364 aaKnown RBP5.57□□□□□ -1.52
RTF1-204ENST00000558117 PSMC5P62195 406 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 KRT83P78385 493 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 CDC20Q12834 499 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 ZNF177Q13360 481 aaPredicted RBP5.57□□□□□ -1.52
RTF1-204ENST00000558117 ART3Q13508 389 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 ACAD10Q6JQN1 1059 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 TMCO3Q6UWJ1 677 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 EFL1Q7Z2Z2 1120 aaKnown RBP5.57□□□□□ -1.52
RTF1-204ENST00000558117 TDRPQ86YL5 185 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 AADATQ8N5Z0 425 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 SPPL2BQ8TCT7 592 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 C2orf15Q8WU43 125 aaKnown RBP5.57□□□□□ -1.52
RTF1-204ENST00000558117 TMED6Q8WW62 240 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 SLC45A3Q96JT2 553 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 RANBP9Q96S59 729 aa5.57□□□□□ -1.52
RTF1-204ENST00000558117 KRT23Q9C075 422 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms