RNA–Protein interactions for RNA: ENST00000557150.5

APEX1-215, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, human

TSL 3

Gene APEX1, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APEX1-215	ENST00000557150	VIP	P01282	170 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	WNT1	P04628	370 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	CHRM5	P08912	532 aa	Predicted RBP	11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	ANXA4	P09525	319 aa	Predicted RBP	11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	HSD17B1	P14061	328 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	PEBP1	P30086	187 aa	Known RBP	11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	GRK3	P35626	688 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	EEFSEC	P57772	596 aa	Known RBP	11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	YBX1	P67809	324 aa	Known RBP	11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	ZXDA	P98168	799 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	RPL6	Q02878	288 aa	Known RBP	11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	SRSF11	Q05519	484 aa	Known RBP	11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	CCNI	Q14094	377 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	TRIM25	Q14258	630 aa	Known RBP	11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	KIR2DS3	Q14952	304 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	MAPKAPK3	Q16644	382 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	PRRT3	Q5FWE3	981 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	DEPDC1	Q5TB30	811 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	DLEU7	Q6UYE1	221 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	TAF8	Q7Z7C8	310 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	TRIM48	Q8IWZ4	208 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	RBM12B	Q8IXT5	1001 aa	Known RBP	11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	SLC15A3	Q8IY34	581 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	TBC1D19	Q8N5T2	526 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	KRTCAP2	Q8N6L1	136 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	OR2L3	Q8NG85	312 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	CLHC1	Q8NHS4	586 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	GTF2H4	Q92759	462 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	TMEM125	Q96AQ2	219 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	ASB9	Q96DX5	294 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	PRAP1	Q96NZ9	151 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	SARG	Q9BW04	601 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	EBPL	Q9BY08	206 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	MS4A8	Q9BY19	250 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	ZMYND15	Q9H091	742 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	TCEAL2	Q9H3H9	227 aa	Predicted RBP	11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	SRMS	Q9H3Y6	488 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	RMND5A	Q9H871	391 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	IL1RL2	Q9HB29	575 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	MUTYH	Q9UIF7	546 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	MCM8	Q9UJA3	840 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	PACSIN3	Q9UKS6	424 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	SNX7	Q9UNH6	387 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	MAN2B2	Q9Y2E5	1009 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	PCDHA9	Q9Y5H5	950 aa		11.72	□□□□□ -0.53
APEX1-215	ENST00000557150	PCM1	Q15154	2024 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	IGKV1-8	A0A0C4DH67	115 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	CCDC163	A0A0D9SF12	145 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	PRORSD1P	A6NEY8	169 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	ISM1	B1AKI9	464 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	TLR4	O00206	839 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	NME4	O00746	187 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	ACOT8	O14734	319 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	MAP3K13	O43283	966 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	MAP3K7	O43318	606 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	DNAJA2	O60884	412 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	ERN1	O75460	977 aa	Known RBP	11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	CLEC3A	O75596	197 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	KRT36	O76013	467 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	FKBP9	O95302	570 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	CSF2	P04141	144 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	DCN	P07585	359 aa	Known RBP	11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	JUND	P17535	347 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	RPL3	P39023	403 aa	Known RBP	11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	AP2B1	P63010	937 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	UBE2I	P63279	158 aa	Known RBP	11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	ZNF763	Q0D2J5	394 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	CAPRIN1	Q14444	709 aa	Known RBP	11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	SF1	Q15637	639 aa	Known RBP	11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	CCDC6	Q16204	474 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	KHDRBS2	Q5VWX1	349 aa	Known RBP	11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	ARMCX6	Q7L4S7	300 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	COMMD6	Q7Z4G1	85 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	CAMKMT	Q7Z624	323 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	SLC9B2	Q86UD5	537 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	GPR180	Q86V85	440 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	ADGRF3	Q8IZF5	1079 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	DEFB119	Q8N690	84 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	ANKRD53	Q8N9V6	530 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	AVL9	Q8NBF6	648 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	GPR156	Q8NFN8	814 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	OR4E2	Q8NGC2	313 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	OR8J3	Q8NGG0	315 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	ITCH	Q96J02	903 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	EGLN2	Q96KS0	407 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	QRFPR	Q96P65	431 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	OR52E6	Q96RD3	313 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	CGREF1	Q99674	301 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	SLC39A3	Q9BRY0	314 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	KCNH6	Q9H252	994 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	OR51B5	Q9H339	312 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	MUC13	Q9H3R2	512 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	TM9SF3	Q9HD45	589 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	SLC6A20	Q9NP91	592 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	CMTM6	Q9NX76	183 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	SPHK1	Q9NYA1	384 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	DLGAP2	Q9P1A6	1054 aa		11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	STX18	Q9P2W9	335 aa	Known RBP	11.71	□□□□□ -0.53
APEX1-215	ENST00000557150	CPNE7	Q9UBL6	633 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms