RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 ASPGQ86U10 573 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 GSPT2Q8IYD1 628 aaKnown RBP10.18□□□□□ -0.78
LINC00239-201ENST00000556973 ARHGEF39Q8N4T4 335 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 APOBEC4Q8WW27 367 aaKnown RBP10.18□□□□□ -0.78
LINC00239-201ENST00000556973 SLC13A3Q8WWT9 602 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 EXTL1Q92935 676 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 COL26A1Q96A83 441 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 C10orf90Q96M02 699 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 TSNARE1Q96NA8 513 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 GPR78Q96P69 363 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 AIF1LQ9BQI0 150 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 TMEM79Q9BSE2 394 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 CD244Q9BZW8 370 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 EPB41L4BQ9H329 900 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 WDR54Q9H977 334 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 SLC22A11Q9NSA0 550 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 RALYQ9UKM9 306 aaKnown RBP10.18□□□□□ -0.78
LINC00239-201ENST00000556973 POLHQ9Y253 713 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 FER1L5A0AVI2 2057 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 EPG5Q9HCE0 2579 aa10.18□□□□□ -0.78
LINC00239-201ENST00000556973 IQANK1A0A1B0GTG1 560 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 SUPT3HB4E1H0 165 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 UBXN8O00124 270 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 CCNT2O60583 730 aaKnown RBP10.17□□□□□ -0.78
LINC00239-201ENST00000556973 SUPT3HO75486 399 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 MED26O95402 600 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 RBP1P09455 135 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 SLC35G6P0C7Q6 338 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 MTHFD2P13995 350 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 ITGAXP20702 1163 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 AHRP35869 848 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 BCL6P41182 706 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 FOLR3P41439 243 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 GLRBP48167 497 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 NFKB2Q00653 900 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 MEF2AQ02078 507 aaPredicted RBP10.17□□□□□ -0.78
LINC00239-201ENST00000556973 PWP1Q13610 501 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 COL9A2Q14055 689 aaPredicted RBP10.17□□□□□ -0.78
LINC00239-201ENST00000556973 SLC9A5Q14940 896 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 TSNAXIP1Q2TAA8 658 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 SOWAHCQ53LP3 525 aaPredicted RBP10.17□□□□□ -0.78
LINC00239-201ENST00000556973 ATG9BQ674R7 924 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 PCSK4Q6UW60 755 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 SLCO4C1Q6ZQN7 724 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 COX15Q7KZN9 410 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 LRRC70Q7Z2Q7 622 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 VN1R4Q7Z5H5 301 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 TMPRSS11BQ86T26 416 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 TRPV3Q8NET8 790 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 OR2Y1Q8NGV0 311 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 UBLCP1Q8WVY7 318 aaPredicted RBP10.17□□□□□ -0.78
LINC00239-201ENST00000556973 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.17□□□□□ -0.78
LINC00239-201ENST00000556973 ESAMQ96AP7 390 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 NACC2Q96BF6 587 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 PITHD1Q9GZP4 211 aaPredicted RBP10.17□□□□□ -0.78
LINC00239-201ENST00000556973 DRC3Q9H069 523 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 ADNPQ9H2P0 1102 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 EHD1Q9H4M9 534 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 NT5DC2Q9H857 520 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 DNAJC11Q9NVH1 559 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 ZNF282Q9UDV7 671 aaPredicted RBP10.17□□□□□ -0.78
LINC00239-201ENST00000556973 ZFP69BQ9UJL9 534 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 NXT1Q9UKK6 140 aaKnown RBP10.17□□□□□ -0.78
LINC00239-201ENST00000556973 PTRH2Q9Y3E5 179 aaKnown RBP10.17□□□□□ -0.78
LINC00239-201ENST00000556973 KCNMB2Q9Y691 235 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 MAU2Q9Y6X3 613 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 PKD1L2Q7Z442 2459 aa10.17□□□□□ -0.78
LINC00239-201ENST00000556973 AHCTF1Q8WYP5 2266 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 LOC400499M0QZD8 3231 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 DSPP15924 2871 aaKnown RBP10.16□□□□□ -0.78
LINC00239-201ENST00000556973 VSTM2BA6NLU5 285 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 H0YIG0 161 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 K7EPI3 171 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 P2RX6O15547 441 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 FOXS1O43638 330 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 KLK8O60259 260 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 RFPL1O75677 317 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 ATXN8OSP0DMR3 200 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 FBLP22087 321 aaKnown RBP10.16□□□□□ -0.78
LINC00239-201ENST00000556973 GSTM2P28161 218 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 SCTRP47872 440 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 AVPR1BP47901 424 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 VSNL1P62760 191 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 REEP5Q00765 189 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 OCA2Q04671 838 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 LAPTM5Q13571 262 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 IL10RAQ13651 578 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 RBBP5Q15291 538 aaKnown RBP10.16□□□□□ -0.78
LINC00239-201ENST00000556973 NKG7Q16617 165 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 PDK4Q16654 411 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 FBXO48Q5FWF7 155 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 TECRLQ5HYJ1 363 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 TMEM214Q6NUQ4 689 aaKnown RBP10.16□□□□□ -0.78
LINC00239-201ENST00000556973 WDR93Q6P2C0 686 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 MED25Q71SY5 747 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 LCA5Q86VQ0 697 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 RAB43Q86YS6 212 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 APLFQ8IW19 511 aaPredicted RBP10.16□□□□□ -0.78
LINC00239-201ENST00000556973 KRT78Q8N1N4 520 aa10.16□□□□□ -0.78
LINC00239-201ENST00000556973 PLD6Q8N2A8 252 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms