RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 TBC1D25Q3MII6 688 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 C14orf28Q4W4Y0 310 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.06□□□□□ -1.76
CPSF2-204ENST00000555244 DEPDC1Q5TB30 811 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 WASH2PQ6VEQ5 465 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 RBM44Q6ZP01 1051 aaKnown RBP4.06□□□□□ -1.76
CPSF2-204ENST00000555244 RFLNAQ6ZTI6 216 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 EFL1Q7Z2Z2 1120 aaKnown RBP4.06□□□□□ -1.76
CPSF2-204ENST00000555244 DTX2Q86UW9 622 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 MARCH9Q86YJ5 346 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 NAGSQ8N159 534 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 SFRP1Q8N474 314 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 TTC30BQ8N4P2 665 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 TRAM1L1Q8N609 369 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 LSM14AQ8ND56 463 aaKnown RBP4.06□□□□□ -1.76
CPSF2-204ENST00000555244 CCNYQ8ND76 341 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 KIAA1524Q8TCG1 905 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 MAPK15Q8TD08 544 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.06□□□□□ -1.76
CPSF2-204ENST00000555244 ASB10Q8WXI3 467 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 ATG4AQ8WYN0 398 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 KRT35Q92764 455 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 P3H4Q92791 437 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 FGF11Q92914 225 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 AP2M1Q96CW1 435 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 RTP4Q96DX8 246 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 HES6Q96HZ4 224 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 FBXL20Q96IG2 436 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 Q96MF0 132 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 PPP1R2P1Q96PQ5 205 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 QKIQ96PU8 341 aaKnown RBP eCLIP4.06□□□□□ -1.76
CPSF2-204ENST00000555244 SMIM14Q96QK8 99 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 AGAP2Q99490 1192 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 BAG1Q99933 345 aaPredicted RBP4.06□□□□□ -1.76
CPSF2-204ENST00000555244 CCDC3Q9BQI4 270 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 AIFM2Q9BRQ8 373 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 ZSCAN5AQ9BUG6 496 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 RIOK2Q9BVS4 552 aaKnown RBP4.06□□□□□ -1.76
CPSF2-204ENST00000555244 GSDMCQ9BYG8 508 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 CARD9Q9H257 536 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 SLC25A32Q9H2D1 315 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 LRRN3Q9H3W5 708 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 UCK1Q9HA47 277 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 MRPL40Q9NQ50 206 aaKnown RBP4.06□□□□□ -1.76
CPSF2-204ENST00000555244 WASH6PQ9NQA3 447 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 KLC4Q9NSK0 619 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 SPATS2LQ9NUQ6 558 aaKnown RBP4.06□□□□□ -1.76
CPSF2-204ENST00000555244 SMOXQ9NWM0 555 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 HACD3Q9P035 362 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 IL17CQ9P0M4 197 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 DNAJB11Q9UBS4 358 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 FAM153AQ9UHL3 310 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 SUFUQ9UMX1 484 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 GPR34Q9UPC5 381 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 USP22Q9UPT9 525 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 HEY1Q9Y5J3 304 aa4.06□□□□□ -1.76
CPSF2-204ENST00000555244 CCDC187A0A096LP49 1063 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 C1orf232A0A0U1RR37 186 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 CPED1A4D0V7 1026 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 GRID2IPA4D2P6 1211 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 OR5K4A6NMS3 321 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 A8MX80 341 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 D6RAR5 112 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 H7C0S8 307 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 PSMD9O00233 223 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 NVLO15381 856 aaKnown RBP4.05□□□□□ -1.76
CPSF2-204ENST00000555244 MPPED1O15442 326 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 ZW10O43264 779 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 USP12O75317 370 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 CSO75390 466 aaKnown RBP4.05□□□□□ -1.76
CPSF2-204ENST00000555244 TJP3O95049 919 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 NXPH3O95157 252 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 IPO7O95373 1038 aaKnown RBP4.05□□□□□ -1.76
CPSF2-204ENST00000555244 ONECUT2O95948 504 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 MT-CYBP00156 380 aaPredicted RBP4.05□□□□□ -1.76
CPSF2-204ENST00000555244 ADH4P08319 380 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 ITGA2BP08514 1039 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 CTPS1P17812 591 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 EGR1P18146 543 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 HLA-DPA1P20036 260 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 CD1CP29017 333 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 FOLR3P41439 243 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 MARCKSL1P49006 195 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 PGDP52209 483 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 RWDD2BP57060 319 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 CCL7P80098 99 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 DMPKQ09013 629 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 AP1B1Q10567 949 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 ILF3Q12906 894 aaKnown RBP eCLIP4.05□□□□□ -1.76
CPSF2-204ENST00000555244 MPP3Q13368 585 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 TRA2AQ13595 282 aaKnown RBP eCLIP4.05□□□□□ -1.76
CPSF2-204ENST00000555244 KCNAB1Q14722 419 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 SLC1A5Q15758 541 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 PTCHD3Q3KNS1 767 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 CCDC38Q502W7 563 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.05□□□□□ -1.76
CPSF2-204ENST00000555244 KCTD11Q693B1 232 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 RAET1GQ6H3X3 334 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 IYDQ6PHW0 289 aa4.05□□□□□ -1.76
CPSF2-204ENST00000555244 CRIP3Q6Q6R5 217 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms