RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 PQLC1Q8N2U9 271 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 METTL4Q8N3J2 472 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 OR2A1Q8NGT9 310 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 DNAJB8Q8NHS0 232 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 DNAJB14Q8TBM8 379 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 COQ8BQ96D53 544 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 APOLD1Q96LR9 279 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 INPP5KQ9BT40 448 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 EBPLQ9BY08 206 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 PITHD1Q9GZP4 211 aaPredicted RBP8.56□□□□□ -1.04
TDP1-210ENST00000554976 C6orf106Q9H6K1 298 aaPredicted RBP8.56□□□□□ -1.04
TDP1-210ENST00000554976 DYRK1BQ9Y463 629 aa8.56□□□□□ -1.04
TDP1-210ENST00000554976 HEATR5BQ9P2D3 2071 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 C15orf38-AP3S2A0A0A6YYH1 394 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 PRR23AA6NEV1 266 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 AQP12BA6NM10 295 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 MAN2B1O00754 1011 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 SCAMP2O15127 329 aaKnown RBP8.55□□□□□ -1.04
TDP1-210ENST00000554976 TIA1P31483 386 aaKnown RBP eCLIP8.55□□□□□ -1.04
TDP1-210ENST00000554976 MEF2AQ02078 507 aaPredicted RBP8.55□□□□□ -1.04
TDP1-210ENST00000554976 HYAL2Q12891 473 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 DYNC1I2Q13409 638 aaKnown RBP8.55□□□□□ -1.04
TDP1-210ENST00000554976 ALG11Q2TAA5 492 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 KIAA0895LQ68EN5 471 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 ARPINQ7Z6K5 226 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 AQP12AQ8IXF9 295 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 ZNF548Q8NEK5 533 aaPredicted RBP8.55□□□□□ -1.04
TDP1-210ENST00000554976 OR52E4Q8NGH9 312 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 GANCQ8TET4 914 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 CREB3L4Q8TEY5 395 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 C17orf50Q8WW18 174 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 REPS1Q96D71 796 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 CDX2Q99626 313 aaPredicted RBP8.55□□□□□ -1.04
TDP1-210ENST00000554976 PKP2Q99959 881 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 MVB12BQ9H7P6 319 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 CAAP1Q9H8G2 361 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 SLC6A20Q9NP91 592 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 PRDM8Q9NQV8 689 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 ZNF624Q9P2J8 865 aaPredicted RBP8.55□□□□□ -1.04
TDP1-210ENST00000554976 TBC1D29Q9UFV1 150 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 ATP6V1HQ9UI12 483 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 SLCO1B1Q9Y6L6 691 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 DGKBQ9Y6T7 804 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 CROCCQ5TZA2 2017 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 C1orf226A1L170 272 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 NVLO15381 856 aaKnown RBP8.55□□□□□ -1.04
TDP1-210ENST00000554976 TPD52L2O43399 206 aaKnown RBP8.55□□□□□ -1.04
TDP1-210ENST00000554976 KCNH1O95259 989 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 SEMA4FO95754 770 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 ACADMP11310 421 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 IL9P15248 144 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 IDSP22304 550 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 SLC7A1P30825 629 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 DGKEP52429 567 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 OR4D2P58180 307 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 SLC14A1Q13336 389 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 MYBPC3Q14896 1274 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 MPEG1Q2M385 716 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 GTDC1Q4AE62 458 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 KIAA1324Q6UXG2 1013 aaKnown RBP8.55□□□□□ -1.04
TDP1-210ENST00000554976 ADGRG5Q8IZF4 528 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 FAM9CQ8IZT9 166 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 C1orf52Q8N6N3 182 aaKnown RBP8.55□□□□□ -1.04
TDP1-210ENST00000554976 OR52E1Q8NGJ3 308 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 SMPDL3AQ92484 453 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 C12orf66Q96MD2 445 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 WDR92Q96MX6 357 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 PHF12Q96QT6 1004 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 CCM2LQ9NUG4 571 aaPredicted RBP8.55□□□□□ -1.04
TDP1-210ENST00000554976 WSB2Q9NYS7 404 aaPredicted RBP8.55□□□□□ -1.04
TDP1-210ENST00000554976 TAC3Q9UHF0 121 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.55□□□□□ -1.04
TDP1-210ENST00000554976 PCDHB14Q9Y5E9 798 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 ADAMTS20P59510 1910 aa8.55□□□□□ -1.04
TDP1-210ENST00000554976 FPGTO14772 594 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 PIM1P11309 404 aaPredicted RBP8.54□□□□□ -1.04
TDP1-210ENST00000554976 GGT1P19440 569 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 PRPS1L1P21108 318 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 ATP6V1C1P21283 382 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 PEX2P28328 305 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 RAB28P51157 221 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 SESN3P58005 492 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 CSNK1G2P78368 415 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 PRKCQQ04759 706 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 ZIC1Q15915 447 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 DPY19L1Q2PZI1 675 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 ZNF385BQ569K4 471 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 SFT2D3Q587I9 215 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 PAGE2BQ5JRK9 111 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 LPCAT4Q643R3 524 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 LPCAT2Q7L5N7 544 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 UBE3DQ7Z6J8 389 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 HIPK4Q8NE63 616 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 CCL4L1Q8NHW4 92 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 WDR48Q8TAF3 677 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 TSSK3Q96PN8 268 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 MS4A8Q9BY19 250 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 PCBD2Q9H0N5 130 aa8.54□□□□□ -1.04
TDP1-210ENST00000554976 KAT8Q9H7Z6 458 aaKnown RBP8.54□□□□□ -1.04
TDP1-210ENST00000554976 TDRKHQ9Y2W6 561 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms