RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 UBE2R2Q712K3 238 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-210ENST00000553779 CPEB2Q7Z5Q1 589 aaKnown RBP9.38□□□□□ -0.91
ACTN1-210ENST00000553779 CILP2Q8IUL8 1156 aa9.38□□□□□ -0.91
ACTN1-210ENST00000553779 REXO1L1PQ8IX06 675 aa9.38□□□□□ -0.91
ACTN1-210ENST00000553779 ZNF808Q8N4W9 903 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-210ENST00000553779 HORMAD2Q8N7B1 307 aa9.38□□□□□ -0.91
ACTN1-210ENST00000553779 AMER3Q8N944 861 aa9.38□□□□□ -0.91
ACTN1-210ENST00000553779 PRELID2Q8N945 189 aa9.38□□□□□ -0.91
ACTN1-210ENST00000553779 OR9A4Q8NGU2 314 aa9.38□□□□□ -0.91
ACTN1-210ENST00000553779 GABPB2Q8TAK5 448 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-210ENST00000553779 RELTQ969Z4 430 aa9.38□□□□□ -0.91
ACTN1-210ENST00000553779 CCDC120Q96HB5 630 aa9.38□□□□□ -0.91
ACTN1-210ENST00000553779 ZNF354BQ96LW1 612 aa9.38□□□□□ -0.91
ACTN1-210ENST00000553779 PRAP1Q96NZ9 151 aa9.38□□□□□ -0.91
ACTN1-210ENST00000553779 UTP23Q9BRU9 249 aaKnown RBP9.38□□□□□ -0.91
ACTN1-210ENST00000553779 RBCK1Q9BYM8 510 aa9.38□□□□□ -0.91
ACTN1-210ENST00000553779 TGIF2Q9GZN2 237 aa9.38□□□□□ -0.91
ACTN1-210ENST00000553779 RNF32Q9H0A6 362 aa9.38□□□□□ -0.91
ACTN1-210ENST00000553779 RBSNQ9H1K0 784 aa9.38□□□□□ -0.91
ACTN1-210ENST00000553779 LZTFL1Q9NQ48 299 aa9.38□□□□□ -0.91
ACTN1-210ENST00000553779 KLHL1Q9NR64 748 aa9.38□□□□□ -0.91
ACTN1-210ENST00000553779 FBXO6Q9NRD1 293 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-210ENST00000553779 ENAMQ9NRM1 1142 aa9.38□□□□□ -0.91
ACTN1-210ENST00000553779 HOMER3Q9NSC5 361 aa9.38□□□□□ -0.91
ACTN1-210ENST00000553779 TRMT6Q9UJA5 497 aaKnown RBP9.38□□□□□ -0.91
ACTN1-210ENST00000553779 KLF2Q9Y5W3 355 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-210ENST00000553779 MAD1L1Q9Y6D9 718 aa9.38□□□□□ -0.91
ACTN1-210ENST00000553779 COMMD10Q9Y6G5 202 aa9.38□□□□□ -0.91
ACTN1-210ENST00000553779 SETD2Q9BYW2 2564 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-210ENST00000553779 IGHV3-20A0A0C4DH32 117 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 SLC19A2O60779 497 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 SERPIND1P05546 499 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 SLC35G6P0C7Q6 338 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 MPC1LP0DKB6 136 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 ERGP11308 486 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 PRF1P14222 555 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 CD46P15529 392 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 ABOP16442 354 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 IL1RNP18510 177 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 HRH2P25021 359 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 EEF1DP29692 281 aaKnown RBP9.37□□□□□ -0.91
ACTN1-210ENST00000553779 PTGER4P35408 488 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 CA7P43166 264 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 KCNJ1P48048 391 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 RGS4P49798 205 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 AGTR2P50052 363 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 ADARP55265 1226 aaKnown RBP9.37□□□□□ -0.91
ACTN1-210ENST00000553779 TBPL1P62380 186 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 ALDH6A1Q02252 535 aaKnown RBP9.37□□□□□ -0.91
ACTN1-210ENST00000553779 SRSF11Q05519 484 aaKnown RBP9.37□□□□□ -0.91
ACTN1-210ENST00000553779 PTK6Q13882 451 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 FAM53BQ14153 422 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 EXT1Q16394 746 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 MEP1AQ16819 746 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 BNC2Q6ZN30 1099 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-210ENST00000553779 C17orf64Q86WR6 236 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 TMEM139Q8IV31 216 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 BEST3Q8N1M1 668 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 TBC1D19Q8N5T2 526 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 SLC5A8Q8N695 610 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 TMEM178AQ8NBL3 297 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 CAMKVQ8NCB2 501 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 OR51Q1Q8NH59 317 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 CALML6Q8TD86 181 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 ZNF480Q8WV37 535 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 ITLN2Q8WWU7 325 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-210ENST00000553779 OR2A5Q96R48 311 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 VN1R1Q9GZP7 353 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 PCBD2Q9H0N5 130 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 TSPAN10Q9H1Z9 355 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-210ENST00000553779 XAB2Q9HCS7 855 aaKnown RBP9.37□□□□□ -0.91
ACTN1-210ENST00000553779 PRM3Q9NNZ6 103 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 C20orf96Q9NUD7 363 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-210ENST00000553779 ANKRD10Q9NXR5 420 aa9.37□□□□□ -0.91
ACTN1-210ENST00000553779 SPG11Q96JI7 2443 aa9.36□□□□□ -0.91
ACTN1-210ENST00000553779 PHF3Q92576 2039 aaKnown RBP9.36□□□□□ -0.91
ACTN1-210ENST00000553779 CSMD1Q96PZ7 3565 aa9.36□□□□□ -0.91
ACTN1-210ENST00000553779 LOC102723996A0A087X1L8 192 aa9.36□□□□□ -0.91
ACTN1-210ENST00000553779 UQCRHLA0A096LP55 91 aa9.36□□□□□ -0.91
ACTN1-210ENST00000553779 IGKV1-8A0A0C4DH67 115 aa9.36□□□□□ -0.91
ACTN1-210ENST00000553779 E7ENX8 843 aa9.36□□□□□ -0.91
ACTN1-210ENST00000553779 H0YIG0 161 aa9.36□□□□□ -0.91
ACTN1-210ENST00000553779 GOLGA8MH3BSY2 632 aa9.36□□□□□ -0.91
ACTN1-210ENST00000553779 SGK494L7N484 410 aa9.36□□□□□ -0.91
ACTN1-210ENST00000553779 FOXS1O43638 330 aa9.36□□□□□ -0.91
ACTN1-210ENST00000553779 NRDCO43847 1150 aa9.36□□□□□ -0.91
ACTN1-210ENST00000553779 KIF5CO60282 957 aa9.36□□□□□ -0.91
ACTN1-210ENST00000553779 AVILO75366 819 aa9.36□□□□□ -0.91
ACTN1-210ENST00000553779 RDH16O75452 317 aa9.36□□□□□ -0.91
ACTN1-210ENST00000553779 CDC123O75794 336 aaPredicted RBP9.36□□□□□ -0.91
ACTN1-210ENST00000553779 NSA2O95478 260 aaKnown RBP9.36□□□□□ -0.91
ACTN1-210ENST00000553779 CYC1P08574 325 aa9.36□□□□□ -0.91
ACTN1-210ENST00000553779 F7P08709 466 aaPredicted RBP9.36□□□□□ -0.91
ACTN1-210ENST00000553779 ARNTP27540 789 aa9.36□□□□□ -0.91
ACTN1-210ENST00000553779 GRNP28799 593 aaKnown RBP9.36□□□□□ -0.91
ACTN1-210ENST00000553779 SLC1A2P43004 574 aa9.36□□□□□ -0.91
ACTN1-210ENST00000553779 CLCN7P51798 805 aa9.36□□□□□ -0.91
ACTN1-210ENST00000553779 TAP2Q03519 686 aa9.36□□□□□ -0.91
ACTN1-210ENST00000553779 CTBP1Q13363 440 aa9.36□□□□□ -0.91
ACTN1-210ENST00000553779 GBX1Q14549 363 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms