RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 SUPT3HO75486 399 aa16.54■□□□□ 0.24
CDK4-208ENST00000551706 CD63P08962 238 aa16.54■□□□□ 0.24
CDK4-208ENST00000551706 RBP1P09455 135 aa16.54■□□□□ 0.24
CDK4-208ENST00000551706 RAB40ALP0C0E4 278 aa16.54■□□□□ 0.24
CDK4-208ENST00000551706 GNAZP19086 355 aa16.54■□□□□ 0.24
CDK4-208ENST00000551706 GLRBP48167 497 aa16.54■□□□□ 0.24
CDK4-208ENST00000551706 DCDP81605 110 aaKnown RBP16.54■□□□□ 0.24
CDK4-208ENST00000551706 MUM1Q2TAK8 710 aa16.54■□□□□ 0.24
CDK4-208ENST00000551706 CRTC2Q53ET0 693 aaPredicted RBP16.54■□□□□ 0.24
CDK4-208ENST00000551706 C4orf17Q53FE4 359 aa16.54■□□□□ 0.24
CDK4-208ENST00000551706 GARNL3Q5VVW2 1013 aa16.54■□□□□ 0.24
CDK4-208ENST00000551706 ZNF385CQ66K41 422 aaPredicted RBP16.54■□□□□ 0.24
CDK4-208ENST00000551706 OR4N4Q8N0Y3 316 aa16.54■□□□□ 0.24
CDK4-208ENST00000551706 STARD8Q92502 1023 aa16.54■□□□□ 0.24
CDK4-208ENST00000551706 EXT2Q93063 718 aa16.54■□□□□ 0.24
CDK4-208ENST00000551706 NEIL2Q969S2 332 aa16.54■□□□□ 0.24
CDK4-208ENST00000551706 GBP5Q96PP8 586 aa16.54■□□□□ 0.24
CDK4-208ENST00000551706 SARGQ9BW04 601 aa16.54■□□□□ 0.24
CDK4-208ENST00000551706 PELI2Q9HAT8 420 aa16.54■□□□□ 0.24
CDK4-208ENST00000551706 CUTCQ9NTM9 273 aa16.54■□□□□ 0.24
CDK4-208ENST00000551706 GPRC5BQ9NZH0 403 aa16.54■□□□□ 0.24
CDK4-208ENST00000551706 DHCR7Q9UBM7 475 aaKnown RBP16.54■□□□□ 0.24
CDK4-208ENST00000551706 SNRNP200O75643 2136 aaKnown RBP16.54■□□□□ 0.24
CDK4-208ENST00000551706 UTP20O75691 2785 aaKnown RBP16.54■□□□□ 0.24
CDK4-208ENST00000551706 TAPBPO15533 448 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 STK16O75716 305 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 RECKO95980 971 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 FAM87AP0C7U9 286 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 PIM1P11309 404 aaPredicted RBP16.53■□□□□ 0.24
CDK4-208ENST00000551706 ALAS2P22557 587 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 HSD17B3P37058 310 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 KCNC1P48547 511 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 CDC16Q13042 620 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 RASA2Q15283 850 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 PRTGQ2VWP7 1150 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 FAM199XQ6PEV8 388 aaPredicted RBP16.53■□□□□ 0.24
CDK4-208ENST00000551706 NXPE4Q6UWF7 544 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 TTLL10Q6ZVT0 673 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 TMPRSS11BQ86T26 416 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 LCA5Q86VQ0 697 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 TDRPQ86YL5 185 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 PLD3Q8IV08 490 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 ACMSDQ8TDX5 336 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 AENQ8WTP8 325 aaKnown RBP16.53■□□□□ 0.24
CDK4-208ENST00000551706 CAVIN3Q969G5 261 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 GPR78Q96P69 363 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 AIF1LQ9BQI0 150 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 TMEM79Q9BSE2 394 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 AKIRIN1Q9H9L7 192 aaPredicted RBP16.53■□□□□ 0.24
CDK4-208ENST00000551706 DNAJC11Q9NVH1 559 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 NDOR1Q9UHB4 597 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 TMCO1Q9UM00 188 aa16.53■□□□□ 0.24
CDK4-208ENST00000551706 PCM1Q15154 2024 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 TRBC2A0A5B9 178 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 UBXN8O00124 270 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 KATNA1O75449 491 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 RFPL1O75677 317 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 WT1P19544 449 aaPredicted RBP16.52■□□□□ 0.24
CDK4-208ENST00000551706 F8A1P23610 371 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 CXCR2P25025 360 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 PTPN4P29074 926 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 GDF5P43026 501 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 HSPA7P48741 367 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 NDUFA9Q16795 377 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 NKAIN1Q4KMZ8 207 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 C1orf189Q5VU69 101 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 PRMT9Q6P2P2 845 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 FAM198BQ6UWH4 519 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 LRRC70Q7Z2Q7 622 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 PLD6Q8N2A8 252 aaKnown RBP16.52■□□□□ 0.24
CDK4-208ENST00000551706 CAMKVQ8NCB2 501 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 UBTD2Q8WUN7 234 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 MVB12AQ96EY5 273 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 PARD6BQ9BYG5 372 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 CD244Q9BZW8 370 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 IFT80Q9P2H3 777 aaPredicted RBP16.52■□□□□ 0.24
CDK4-208ENST00000551706 GPN3Q9UHW5 284 aaPredicted RBP16.52■□□□□ 0.24
CDK4-208ENST00000551706 CDC14AQ9UNH5 594 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 FARSAQ9Y285 508 aaKnown RBP16.52■□□□□ 0.24
CDK4-208ENST00000551706 PADI2Q9Y2J8 665 aa16.52■□□□□ 0.24
CDK4-208ENST00000551706 MAP2K7O14733 419 aa16.51■□□□□ 0.23
CDK4-208ENST00000551706 CLGNO14967 610 aa16.51■□□□□ 0.23
CDK4-208ENST00000551706 H2AFYO75367 372 aaKnown RBP16.51■□□□□ 0.23
CDK4-208ENST00000551706 ONECUT2O95948 504 aa16.51■□□□□ 0.23
CDK4-208ENST00000551706 SHBGP04278 402 aa16.51■□□□□ 0.23
CDK4-208ENST00000551706 MTHFD2P13995 350 aa16.51■□□□□ 0.23
CDK4-208ENST00000551706 GFAPP14136 432 aa16.51■□□□□ 0.23
CDK4-208ENST00000551706 BCL6P41182 706 aa16.51■□□□□ 0.23
CDK4-208ENST00000551706 ALDH18A1P54886 795 aaKnown RBP16.51■□□□□ 0.23
CDK4-208ENST00000551706 NCF4Q15080 339 aa16.51■□□□□ 0.23
CDK4-208ENST00000551706 PDK4Q16654 411 aa16.51■□□□□ 0.23
CDK4-208ENST00000551706 C18orf21Q32NC0 220 aaPredicted RBP16.51■□□□□ 0.23
CDK4-208ENST00000551706 TECRLQ5HYJ1 363 aa16.51■□□□□ 0.23
CDK4-208ENST00000551706 CATSPEREQ5SY80 951 aa16.51■□□□□ 0.23
CDK4-208ENST00000551706 ATG9BQ674R7 924 aa16.51■□□□□ 0.23
CDK4-208ENST00000551706 SYVN1Q86TM6 617 aa16.51■□□□□ 0.23
CDK4-208ENST00000551706 ASPGQ86U10 573 aa16.51■□□□□ 0.23
CDK4-208ENST00000551706 MFSD9Q8NBP5 474 aa16.51■□□□□ 0.23
CDK4-208ENST00000551706 SCYL1Q96KG9 808 aa16.51■□□□□ 0.23
CDK4-208ENST00000551706 CATSPER2Q96P56 530 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms