RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 NEK10Q6ZWH5 1172 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 PAQR7Q86WK9 346 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 OTUD6BQ8N6M0 293 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 FBXO15Q8NCQ5 510 aaPredicted RBP7.24□□□□□ -1.25
NEK3-201ENST00000550331 CATSPER1Q8NEC5 780 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 MAIP1Q8WWC4 291 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 HAS2Q92819 552 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 RELTQ969Z4 430 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 RERGQ96A58 199 aaPredicted RBP7.24□□□□□ -1.25
NEK3-201ENST00000550331 C8orf44Q96CB5 159 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 MFSD3Q96ES6 412 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 OR2A5Q96R48 311 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 OCSTAMPQ9BR26 566 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 MESP1Q9BRJ9 268 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 ACAT2Q9BWD1 397 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 RNF32Q9H0A6 362 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 MRPS30Q9NP92 439 aaKnown RBP7.24□□□□□ -1.25
NEK3-201ENST00000550331 MKKSQ9NPJ1 570 aaPredicted RBP7.24□□□□□ -1.25
NEK3-201ENST00000550331 INTS10Q9NVR2 710 aaKnown RBP7.24□□□□□ -1.25
NEK3-201ENST00000550331 SYBUQ9NX95 663 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 KLHL42Q9P2K6 505 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 TRPC4Q9UBN4 977 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 SOX13Q9UN79 622 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 RUVBL1Q9Y265 456 aaKnown RBP7.24□□□□□ -1.25
NEK3-201ENST00000550331 MRPS2Q9Y399 296 aaKnown RBP7.24□□□□□ -1.25
NEK3-201ENST00000550331 CNTRLQ7Z7A1 2325 aa7.24□□□□□ -1.25
NEK3-201ENST00000550331 IGKV1-8A0A0C4DH67 115 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 GOLGA8KD6RF30 607 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 E5RI56 91 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 GOLGA8TH3BQL2 631 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 ZG16O60844 167 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 SLC16A8O95907 504 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 HEXBP07686 556 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 CYC1P08574 325 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 ANXA5P08758 320 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 MYBL2P10244 700 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 ICAM2P13598 275 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 PAMP19021 973 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 MGAT1P26572 445 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 CDC25BP30305 580 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 FMO4P31512 558 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 TDGF1P3P51864 188 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 PNLIPRP1P54315 467 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 YBX1P67809 324 aaKnown RBP7.23□□□□□ -1.25
NEK3-201ENST00000550331 ABATP80404 500 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 SARNPP82979 210 aaKnown RBP7.23□□□□□ -1.25
NEK3-201ENST00000550331 FAM53BQ14153 422 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 KLHL38Q2WGJ6 581 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 TTLL9Q3SXZ7 439 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 ACSBG2Q5FVE4 666 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 TMEM205Q6UW68 189 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 SUSD1Q6UWL2 747 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 GSTA5Q7RTV2 222 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 CILP2Q8IUL8 1156 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 PRSS58Q8IYP2 241 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 ARHGEF39Q8N4T4 335 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 AMER3Q8N944 861 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 OR1N1Q8NGS0 311 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 BRIX1Q8TDN6 353 aaKnown RBP7.23□□□□□ -1.25
NEK3-201ENST00000550331 NR4A3Q92570 626 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 KCNJ9Q92806 393 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 LURAP1Q96LR2 239 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 EBNA1BP2Q99848 306 aaKnown RBP7.23□□□□□ -1.25
NEK3-201ENST00000550331 DRC3Q9H069 523 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 ZNF700Q9H0M5 742 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 SYNPO2LQ9H987 977 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 HOMER3Q9NSC5 361 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 PTGFRNQ9P2B2 879 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 STOX2Q9P2F5 926 aaPredicted RBP7.23□□□□□ -1.25
NEK3-201ENST00000550331 TAC3Q9UHF0 121 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 GUCA1BQ9UMX6 200 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 CRYL1Q9Y2S2 319 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 PCM1Q15154 2024 aa7.23□□□□□ -1.25
NEK3-201ENST00000550331 TACC2O95359 2948 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 DOCK10Q96BY6 2186 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.22□□□□□ -1.25
NEK3-201ENST00000550331 E7ENX8 843 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 H0YIG0 161 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 FOXS1O43638 330 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 CRYABP02511 175 aaKnown RBP7.22□□□□□ -1.25
NEK3-201ENST00000550331 C8orf89P0DMQ9 161 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 ENO3P13929 434 aaPredicted RBP7.22□□□□□ -1.25
NEK3-201ENST00000550331 HRH2P25021 359 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 ADH6P28332 368 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 MAGEA6P43360 314 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 CLCN7P51798 805 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 TAP2Q03519 686 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 EEF1A2Q05639 463 aaKnown RBP7.22□□□□□ -1.25
NEK3-201ENST00000550331 ART3Q13508 389 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 KCNJ11Q14654 390 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 PCOLCEQ15113 449 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 NDUFA9Q16795 377 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 TUSC1Q2TAM9 212 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 HKDC1Q2TB90 917 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 ZNF470Q6ECI4 717 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 NEPROQ6NW34 567 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 CES3Q6UWW8 571 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 CENPUQ71F23 418 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 GDF7Q7Z4P5 450 aa7.22□□□□□ -1.25
NEK3-201ENST00000550331 FJX1Q86VR8 437 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms