RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 KIAA1143Q96AT1 154 aaPredicted RBP21.49■■□□□ 1.03
BRF1-216ENST00000550208 PHF21BQ96EK2 531 aa21.49■■□□□ 1.03
BRF1-216ENST00000550208 TMEM109Q9BVC6 243 aa21.49■■□□□ 1.03
BRF1-216ENST00000550208 OPTCQ9UBM4 332 aa21.49■■□□□ 1.03
BRF1-216ENST00000550208 DSCR3O14972 297 aa21.48■■□□□ 1.03
BRF1-216ENST00000550208 SMIM24O75264 130 aa21.48■■□□□ 1.03
BRF1-216ENST00000550208 KATNA1O75449 491 aa21.48■■□□□ 1.03
BRF1-216ENST00000550208 SIX3O95343 332 aaPredicted RBP21.48■■□□□ 1.03
BRF1-216ENST00000550208 CAPN1P07384 714 aa21.48■■□□□ 1.03
BRF1-216ENST00000550208 GSTA1P08263 222 aa21.48■■□□□ 1.03
BRF1-216ENST00000550208 SCTRP47872 440 aa21.48■■□□□ 1.03
BRF1-216ENST00000550208 DNASE1L3Q13609 305 aa21.48■■□□□ 1.03
BRF1-216ENST00000550208 RBBP5Q15291 538 aaKnown RBP21.48■■□□□ 1.03
BRF1-216ENST00000550208 PCBP2Q15366 365 aaKnown RBP eCLIP21.48■■□□□ 1.03
BRF1-216ENST00000550208 ASPGQ86U10 573 aa21.48■■□□□ 1.03
BRF1-216ENST00000550208 LCA5Q86VQ0 697 aa21.48■■□□□ 1.03
BRF1-216ENST00000550208 IQCKQ8N0W5 287 aa21.48■■□□□ 1.03
BRF1-216ENST00000550208 RIBC1Q8N443 379 aaPredicted RBP21.48■■□□□ 1.03
BRF1-216ENST00000550208 TEX9Q8N6V9 391 aa21.48■■□□□ 1.03
BRF1-216ENST00000550208 SLC13A3Q8WWT9 602 aa21.48■■□□□ 1.03
BRF1-216ENST00000550208 C10orf90Q96M02 699 aa21.48■■□□□ 1.03
BRF1-216ENST00000550208 GEMIN8Q9NWZ8 242 aaKnown RBP21.48■■□□□ 1.03
BRF1-216ENST00000550208 LGALS13Q9UHV8 139 aa21.48■■□□□ 1.03
BRF1-216ENST00000550208 TMCO1Q9UM00 188 aa21.48■■□□□ 1.03
BRF1-216ENST00000550208 MRPS18BQ9Y676 258 aaKnown RBP21.48■■□□□ 1.03
BRF1-216ENST00000550208 TXNDC9O14530 226 aa21.47■■□□□ 1.03
BRF1-216ENST00000550208 ITGAXP20702 1163 aa21.47■■□□□ 1.03
BRF1-216ENST00000550208 EMP3P54852 163 aa21.47■■□□□ 1.03
BRF1-216ENST00000550208 UCNP55089 124 aa21.47■■□□□ 1.03
BRF1-216ENST00000550208 SNRPNP63162 240 aaKnown RBP21.47■■□□□ 1.03
BRF1-216ENST00000550208 DCDP81605 110 aaKnown RBP21.47■■□□□ 1.03
BRF1-216ENST00000550208 DOC2AQ14183 400 aa21.47■■□□□ 1.03
BRF1-216ENST00000550208 SLBPQ14493 270 aaKnown RBP eCLIP21.47■■□□□ 1.03
BRF1-216ENST00000550208 COL28A1Q2UY09 1125 aa21.47■■□□□ 1.03
BRF1-216ENST00000550208 XKR6Q5GH73 641 aa21.47■■□□□ 1.03
BRF1-216ENST00000550208 ARHGEF39Q8N4T4 335 aa21.47■■□□□ 1.03
BRF1-216ENST00000550208 TBC1D19Q8N5T2 526 aa21.47■■□□□ 1.03
BRF1-216ENST00000550208 METTL27Q8N6F8 245 aaPredicted RBP21.47■■□□□ 1.03
BRF1-216ENST00000550208 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.47■■□□□ 1.03
BRF1-216ENST00000550208 MOCOSQ96EN8 888 aa21.47■■□□□ 1.03
BRF1-216ENST00000550208 DPH2Q9BQC3 489 aaPredicted RBP21.47■■□□□ 1.03
BRF1-216ENST00000550208 SLC22A11Q9NSA0 550 aa21.47■■□□□ 1.03
BRF1-216ENST00000550208 FARSAQ9Y285 508 aaKnown RBP21.47■■□□□ 1.03
BRF1-216ENST00000550208 MRPS2Q9Y399 296 aaKnown RBP21.47■■□□□ 1.03
BRF1-216ENST00000550208 TNPO3Q9Y5L0 923 aaKnown RBP21.47■■□□□ 1.03
BRF1-216ENST00000550208 A0A1B0GX78 115 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 ERLIN1O75477 346 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 EPB42P16452 691 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 KRT4P19013 534 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 EEF1DP29692 281 aaKnown RBP21.46■■□□□ 1.03
BRF1-216ENST00000550208 OR1D4P47884 311 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 TMPRSS3P57727 454 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 CXADRP78310 365 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 IRF8Q02556 426 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 SLC18A2Q05940 514 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 VAC14Q08AM6 782 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 CHIT1Q13231 466 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 MUM1Q2TAK8 710 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 NKAIN1Q4KMZ8 207 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 ARHGAP40Q5TG30 622 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 MLIPQ5VWP3 458 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 C4orf33Q8N1A6 199 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 ANKRD53Q8N9V6 530 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 KCT2Q8NC54 265 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 CAMKVQ8NCB2 501 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 ZBTB9Q96C00 473 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 WDR34Q96EX3 536 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 EFHD1Q9BUP0 239 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 NLNQ9BYT8 704 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 EMCNQ9ULC0 261 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 ZNF490Q9ULM2 529 aaPredicted RBP21.46■■□□□ 1.03
BRF1-216ENST00000550208 ANGPTL3Q9Y5C1 460 aa21.46■■□□□ 1.03
BRF1-216ENST00000550208 FER1L5A0AVI2 2057 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 C21orf140B9A014 251 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 STX16-NPEPL1H3BU86 382 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 K7ENP7 123 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 STX16O14662 325 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 DLX3O60479 287 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 GLRA3O75311 464 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 SERPIND1P05546 499 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 CD22P20273 847 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 CXCR2P25025 360 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 CRHR1P34998 444 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 AHRP35869 848 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 CASP2P42575 452 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 CCT5P48643 541 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 NFKB2Q00653 900 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 ZNF844Q08AG5 666 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 GTF2H2Q13888 395 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 SLC9A5Q14940 896 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 BEND6Q5SZJ8 279 aaPredicted RBP21.45■■□□□ 1.02
BRF1-216ENST00000550208 GARNL3Q5VVW2 1013 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 GTF2H2CQ6P1K8 395 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 INO80CQ6PI98 192 aaPredicted RBP21.45■■□□□ 1.02
BRF1-216ENST00000550208 FAM198BQ6UWH4 519 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 TRABD2AQ86V40 505 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 PTCD3Q96EY7 689 aaKnown RBP21.45■■□□□ 1.02
BRF1-216ENST00000550208 SLC45A3Q96JT2 553 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 ZIM3Q96PE6 472 aa21.45■■□□□ 1.02
BRF1-216ENST00000550208 GPR87Q9BY21 358 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms