RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 CRB3Q9BUF7 120 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 UNKQ9C0B0 810 aaKnown RBP16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 SOX17Q9H6I2 414 aaPredicted RBP16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 C14orf105Q9NVL8 296 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 NINJ2Q9NZG7 142 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 TRPC4Q9UBN4 977 aa16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 PRRC2CQ9Y520 2896 aaKnown RBP16.39■□□□□ 0.21
CHMP1A-208ENST00000550102 IGLV3-12A0A075B6K2 115 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 A0A0A6YYC8 382 aaPredicted RBP16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 TRBC2A0A5B9 178 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 I3L1I5 382 aaPredicted RBP16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 AGPSO00116 658 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 SUV39H1O43463 412 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 CEACAM4O75871 244 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 ZGLP1P0C6A0 271 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 CD1DP15813 335 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 CSHL1Q14406 222 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 RBBP7Q16576 425 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 DCAF10Q5QP82 559 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 RAPH1Q70E73 1250 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 CMC1Q7Z7K0 106 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 TMPRSS11BQ86T26 416 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 TBC1D1Q86TI0 1168 aaPredicted RBP16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 ASPGQ86U10 573 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 THOC6Q86W42 341 aaKnown RBP16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 GPSM1Q86YR5 675 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 TMEM151BQ8IW70 566 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 TCAIMQ8N3R3 496 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 SPATA6LQ8N4H0 392 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 AMER3Q8N944 861 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 MFSD9Q8NBP5 474 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 OR4K1Q8NGD4 311 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 VPS50Q96JG6 964 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 UBXN10Q96LJ8 280 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 ACSS3Q9H6R3 686 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 PELI2Q9HAT8 420 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 SEMA3GQ9NS98 782 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 GPR83Q9NYM4 423 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 ANAPC2Q9UJX6 822 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 FBXL4Q9UKA2 621 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 MAP4K5Q9Y4K4 846 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 KCNE2Q9Y6J6 123 aa16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 UBR5O95071 2799 aaPredicted RBP16.38■□□□□ 0.21
CHMP1A-208ENST00000550102 NCF1BA6NI72 391 aaPredicted RBP16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 NCF1CA8MVU1 366 aaPredicted RBP16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 J3QKU1 62 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 K7EM74 188 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 FOXS1O43638 330 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 OR1F1O43749 312 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 WDR47O94967 919 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 S100BP04271 92 aaPredicted RBP16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 SLC35E2BP0CK96 405 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 NCF1P14598 390 aaPredicted RBP16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 CRABP2P29373 138 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 SLC26A3P40879 764 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 AVPR1BP47901 424 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 REEP5Q00765 189 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 MEF2AQ02078 507 aaPredicted RBP16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 KLC1Q07866 573 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 KLRB1Q12918 225 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 TGFBIQ15582 683 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 CDKL4Q5MAI5 379 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 CATSPEREQ5SY80 951 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 TMEM214Q6NUQ4 689 aaKnown RBP16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 CCDC91Q7Z6B0 441 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 KLHDC8AQ8IYD2 350 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 PRSS58Q8IYP2 241 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 ZCCHC10Q8TBK6 192 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 RHBDF1Q96CC6 855 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 SARGQ9BW04 601 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 CDC42EP4Q9H3Q1 356 aaKnown RBP16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 CNOT10Q9H9A5 744 aaKnown RBP16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 MLXIPLQ9NP71 852 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 MKKSQ9NPJ1 570 aaPredicted RBP16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 WWOXQ9NZC7 414 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 C3orf18Q9UK00 162 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 SLC22A14Q9Y267 594 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 MRPS2Q9Y399 296 aaKnown RBP16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 PCDHGB7Q9Y5F8 929 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 HS3ST3B1Q9Y662 390 aa16.37■□□□□ 0.21
CHMP1A-208ENST00000550102 A6NL46 340 aa16.36■□□□□ 0.21
CHMP1A-208ENST00000550102 H0YIG0 161 aa16.36■□□□□ 0.21
CHMP1A-208ENST00000550102 SOCS6O14544 535 aa16.36■□□□□ 0.21
CHMP1A-208ENST00000550102 NDUFS4O43181 175 aa16.36■□□□□ 0.21
CHMP1A-208ENST00000550102 IPO13O94829 963 aaKnown RBP16.36■□□□□ 0.21
CHMP1A-208ENST00000550102 NSA2O95478 260 aaKnown RBP16.36■□□□□ 0.21
CHMP1A-208ENST00000550102 ACSL3O95573 720 aa16.36■□□□□ 0.21
CHMP1A-208ENST00000550102 ECHS1P30084 290 aa16.36■□□□□ 0.21
CHMP1A-208ENST00000550102 SLC6A12P48065 614 aa16.36■□□□□ 0.21
CHMP1A-208ENST00000550102 OR4D1Q15615 310 aa16.36■□□□□ 0.21
CHMP1A-208ENST00000550102 UAP1Q16222 522 aaPredicted RBP16.36■□□□□ 0.21
CHMP1A-208ENST00000550102 FDCSPQ8NFU4 85 aa16.36■□□□□ 0.21
CHMP1A-208ENST00000550102 OR9A4Q8NGU2 314 aa16.36■□□□□ 0.21
CHMP1A-208ENST00000550102 SLC13A3Q8WWT9 602 aa16.36■□□□□ 0.21
CHMP1A-208ENST00000550102 KIAA1191Q96A73 305 aa16.36■□□□□ 0.21
CHMP1A-208ENST00000550102 TM4SF19Q96DZ7 209 aa16.36■□□□□ 0.21
CHMP1A-208ENST00000550102 MRRFQ96E11 262 aaKnown RBP16.36■□□□□ 0.21
CHMP1A-208ENST00000550102 AIF1LQ9BQI0 150 aa16.36■□□□□ 0.21
CHMP1A-208ENST00000550102 YIPF2Q9BWQ6 316 aa16.36■□□□□ 0.21
CHMP1A-208ENST00000550102 RNF112Q9ULX5 631 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms