RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 EXT2Q93063 718 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 ESAMQ96AP7 390 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 SLC45A3Q96JT2 553 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 SCYL1Q96KG9 808 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 EFCAB11Q9BUY7 163 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 AKIRIN1Q9H9L7 192 aaPredicted RBP13.81□□□□□ -0.2
DDX54-203ENST00000546869 TXLNGQ9NUQ3 528 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 IRAK4Q9NWZ3 460 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 ZFP69BQ9UJL9 534 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 GRID1Q9ULK0 1009 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 ASB1Q9Y576 335 aa13.81□□□□□ -0.2
DDX54-203ENST00000546869 ANKRD11Q6UB99 2663 aaPredicted RBP13.81□□□□□ -0.2
DDX54-203ENST00000546869 FEZF1A0PJY2 475 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 K7ENP7 123 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 UGDHO60701 494 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 GLRA3O75311 464 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 KATNA1O75449 491 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 ALBP02768 609 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 EIF2S1P05198 315 aaKnown RBP13.8□□□□□ -0.2
DDX54-203ENST00000546869 CAPN1P07384 714 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 PIM1P11309 404 aaPredicted RBP13.8□□□□□ -0.2
DDX54-203ENST00000546869 KRT4P19013 534 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 TCN2P20062 427 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 TAC1P20366 129 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 AGTR2P50052 363 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 NDUFA9Q16795 377 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 CCDC153Q494R4 210 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 BEND6Q5SZJ8 279 aaPredicted RBP13.8□□□□□ -0.2
DDX54-203ENST00000546869 INO80CQ6PI98 192 aaPredicted RBP13.8□□□□□ -0.2
DDX54-203ENST00000546869 LRIG3Q6UXM1 1119 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 CCDC81Q6ZN84 652 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 TTLL10Q6ZVT0 673 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 ASPGQ86U10 573 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 TRABD2AQ86V40 505 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 PLD3Q8IV08 490 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 KRT78Q8N1N4 520 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 TRPV3Q8NET8 790 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 NT5CQ8TCD5 201 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 SLC13A3Q8WWT9 602 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 MR1Q95460 341 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 GPN2Q9H9Y4 310 aaPredicted RBP13.8□□□□□ -0.2
DDX54-203ENST00000546869 STARD5Q9NSY2 213 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 GEMIN8Q9NWZ8 242 aaKnown RBP13.8□□□□□ -0.2
DDX54-203ENST00000546869 MKS1Q9NXB0 559 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 CPSF2Q9P2I0 782 aaKnown RBP13.8□□□□□ -0.2
DDX54-203ENST00000546869 DHCR7Q9UBM7 475 aaKnown RBP13.8□□□□□ -0.2
DDX54-203ENST00000546869 CROTQ9UKG9 612 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 CDC14AQ9UNH5 594 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 RUVBL1Q9Y265 456 aaKnown RBP13.8□□□□□ -0.2
DDX54-203ENST00000546869 SLC22A7Q9Y694 548 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 MAP1BP46821 2468 aaKnown RBP13.8□□□□□ -0.2
DDX54-203ENST00000546869 DMXL2Q8TDJ6 3036 aa13.8□□□□□ -0.2
DDX54-203ENST00000546869 SMIM23A6NLE4 172 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 GOLGA8RI6L899 631 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 TK2O00142 265 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 E2F3O00716 465 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 OR1F1O43749 312 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 PRAMEF4O60810 478 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 LIFP15018 202 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 ALAS2P22557 587 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 VARSP26640 1264 aaKnown RBP13.79□□□□□ -0.2
DDX54-203ENST00000546869 DLSTP36957 453 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 MC1RQ01726 317 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 ZNF844Q08AG5 666 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 VAC14Q08AM6 782 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 DOC2AQ14183 400 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 HKDC1Q2TB90 917 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 NKAIN1Q4KMZ8 207 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 FBXO48Q5FWF7 155 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 XKR6Q5GH73 641 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 PAGE2BQ5JRK9 111 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 PRAMEF9Q5VWM5 478 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 LIPJQ5W064 366 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 TMEM214Q6NUQ4 689 aaKnown RBP13.79□□□□□ -0.2
DDX54-203ENST00000546869 FAM199XQ6PEV8 388 aaPredicted RBP13.79□□□□□ -0.2
DDX54-203ENST00000546869 TMIGD1Q6UXZ0 262 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 TMPRSS11BQ86T26 416 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 SLC22A9Q8IVM8 553 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 PTGR2Q8N8N7 351 aaPredicted RBP13.79□□□□□ -0.2
DDX54-203ENST00000546869 SNX31Q8N9S9 440 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 ZSCAN1Q8NBB4 408 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 ZNF740Q8NDX6 193 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 CT55Q8WUE5 264 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 UBE2E3Q969T4 207 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 FKBP10Q96AY3 582 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 C10orf90Q96M02 699 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 CHST8Q9H2A9 424 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 SLC26A1Q9H2B4 701 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 SPNS1Q9H2V7 528 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 SENP1Q9P0U3 644 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 FARSAQ9Y285 508 aaKnown RBP13.79□□□□□ -0.2
DDX54-203ENST00000546869 TSC22D4Q9Y3Q8 395 aa13.79□□□□□ -0.2
DDX54-203ENST00000546869 USP24Q9UPU5 2620 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 ANKRD12Q6UB98 2062 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 HEATR5BQ9P2D3 2071 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 A8MT66 165 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 COPEO14579 308 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 P2RX6O15547 441 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 SERPINA6P08185 405 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 SLC35G6P0C7Q6 338 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms