RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 SNRPNP63162 240 aaKnown RBP18.23■□□□□ 0.51
DDX55-211ENST00000544429 DCDP81605 110 aaKnown RBP18.23■□□□□ 0.51
DDX55-211ENST00000544429 NKAIN1Q4KMZ8 207 aa18.23■□□□□ 0.51
DDX55-211ENST00000544429 ATG9BQ674R7 924 aa18.23■□□□□ 0.51
DDX55-211ENST00000544429 METTL2BQ6P1Q9 378 aaKnown RBP18.23■□□□□ 0.51
DDX55-211ENST00000544429 TTLL10Q6ZVT0 673 aa18.23■□□□□ 0.51
DDX55-211ENST00000544429 TMPRSS11BQ86T26 416 aa18.23■□□□□ 0.51
DDX55-211ENST00000544429 TTC29Q8NA56 475 aaPredicted RBP18.23■□□□□ 0.51
DDX55-211ENST00000544429 RERGQ96A58 199 aaPredicted RBP18.23■□□□□ 0.51
DDX55-211ENST00000544429 MRPL57Q9BQC6 102 aaKnown RBP18.23■□□□□ 0.51
DDX55-211ENST00000544429 SLC7A5P2Q9GIP4 190 aa18.23■□□□□ 0.51
DDX55-211ENST00000544429 TXLNGQ9NUQ3 528 aa18.23■□□□□ 0.51
DDX55-211ENST00000544429 IRAK4Q9NWZ3 460 aa18.23■□□□□ 0.51
DDX55-211ENST00000544429 XPR1Q9UBH6 696 aa18.23■□□□□ 0.51
DDX55-211ENST00000544429 TBK1Q9UHD2 729 aa18.23■□□□□ 0.51
DDX55-211ENST00000544429 MRPS18BQ9Y676 258 aaKnown RBP18.23■□□□□ 0.51
DDX55-211ENST00000544429 A0A1W2PPM1 405 aa18.22■□□□□ 0.51
DDX55-211ENST00000544429 TK2O00142 265 aa18.22■□□□□ 0.51
DDX55-211ENST00000544429 S100BP04271 92 aaPredicted RBP18.22■□□□□ 0.51
DDX55-211ENST00000544429 EIF2S1P05198 315 aaKnown RBP18.22■□□□□ 0.51
DDX55-211ENST00000544429 C1GALT1C1LP0DN25 315 aa18.22■□□□□ 0.51
DDX55-211ENST00000544429 PTPN4P29074 926 aa18.22■□□□□ 0.51
DDX55-211ENST00000544429 GRK3P35626 688 aa18.22■□□□□ 0.51
DDX55-211ENST00000544429 AHRP35869 848 aa18.22■□□□□ 0.51
DDX55-211ENST00000544429 SLCO1A2P46721 670 aa18.22■□□□□ 0.51
DDX55-211ENST00000544429 CXADRP78310 365 aa18.22■□□□□ 0.51
DDX55-211ENST00000544429 MEF2AQ02078 507 aaPredicted RBP18.22■□□□□ 0.51
DDX55-211ENST00000544429 NCF4Q15080 339 aa18.22■□□□□ 0.51
DDX55-211ENST00000544429 PCBP2Q15366 365 aaKnown RBP eCLIP18.22■□□□□ 0.51
DDX55-211ENST00000544429 PDK4Q16654 411 aa18.22■□□□□ 0.51
DDX55-211ENST00000544429 MUM1Q2TAK8 710 aa18.22■□□□□ 0.51
DDX55-211ENST00000544429 C1orf189Q5VU69 101 aa18.22■□□□□ 0.51
DDX55-211ENST00000544429 MRPL14Q6P1L8 145 aaKnown RBP18.22■□□□□ 0.51
DDX55-211ENST00000544429 COX15Q7KZN9 410 aa18.22■□□□□ 0.51
DDX55-211ENST00000544429 DTWD1Q8N5C7 304 aa18.22■□□□□ 0.51
DDX55-211ENST00000544429 ANKRD53Q8N9V6 530 aa18.22■□□□□ 0.51
DDX55-211ENST00000544429 OR2W6PQ8NHA6 318 aa18.22■□□□□ 0.51
DDX55-211ENST00000544429 STARD8Q92502 1023 aa18.22■□□□□ 0.51
DDX55-211ENST00000544429 MVB12AQ96EY5 273 aa18.22■□□□□ 0.51
DDX55-211ENST00000544429 MRPL46Q9H2W6 279 aaKnown RBP18.22■□□□□ 0.51
DDX55-211ENST00000544429 GEMIN8Q9NWZ8 242 aaKnown RBP18.22■□□□□ 0.51
DDX55-211ENST00000544429 K7EPI3 171 aa18.21■□□□□ 0.51
DDX55-211ENST00000544429 CNOT3O75175 753 aaKnown RBP18.21■□□□□ 0.51
DDX55-211ENST00000544429 KLF7O75840 302 aaPredicted RBP18.21■□□□□ 0.51
DDX55-211ENST00000544429 WFS1O76024 890 aa18.21■□□□□ 0.51
DDX55-211ENST00000544429 GSTA1P08263 222 aa18.21■□□□□ 0.51
DDX55-211ENST00000544429 AGXTP21549 392 aa18.21■□□□□ 0.51
DDX55-211ENST00000544429 VARSP26640 1264 aaKnown RBP18.21■□□□□ 0.51
DDX55-211ENST00000544429 CASP2P42575 452 aa18.21■□□□□ 0.51
DDX55-211ENST00000544429 COL9A2Q14055 689 aaPredicted RBP18.21■□□□□ 0.51
DDX55-211ENST00000544429 FAM53BQ14153 422 aa18.21■□□□□ 0.51
DDX55-211ENST00000544429 TBCCQ15814 346 aa18.21■□□□□ 0.51
DDX55-211ENST00000544429 PFKFB4Q16877 469 aa18.21■□□□□ 0.51
DDX55-211ENST00000544429 ARHGAP40Q5TG30 622 aa18.21■□□□□ 0.51
DDX55-211ENST00000544429 TMEM214Q6NUQ4 689 aaKnown RBP18.21■□□□□ 0.51
DDX55-211ENST00000544429 PRMT9Q6P2P2 845 aa18.21■□□□□ 0.51
DDX55-211ENST00000544429 GPR155Q7Z3F1 870 aa18.21■□□□□ 0.51
DDX55-211ENST00000544429 FKBP10Q96AY3 582 aa18.21■□□□□ 0.51
DDX55-211ENST00000544429 C17orf62Q9BQA9 187 aa18.21■□□□□ 0.51
DDX55-211ENST00000544429 AIF1LQ9BQI0 150 aa18.21■□□□□ 0.51
DDX55-211ENST00000544429 TMEM109Q9BVC6 243 aa18.21■□□□□ 0.51
DDX55-211ENST00000544429 PITHD1Q9GZP4 211 aaPredicted RBP18.21■□□□□ 0.51
DDX55-211ENST00000544429 SLC26A1Q9H2B4 701 aa18.21■□□□□ 0.51
DDX55-211ENST00000544429 ACTL8Q9H568 366 aa18.21■□□□□ 0.51
DDX55-211ENST00000544429 NT5DC2Q9H857 520 aa18.21■□□□□ 0.51
DDX55-211ENST00000544429 TMEM216Q9P0N5 145 aa18.21■□□□□ 0.51
DDX55-211ENST00000544429 LGALS13Q9UHV8 139 aa18.21■□□□□ 0.51
DDX55-211ENST00000544429 ZFP69BQ9UJL9 534 aa18.21■□□□□ 0.51
DDX55-211ENST00000544429 TMCO1Q9UM00 188 aa18.21■□□□□ 0.51
DDX55-211ENST00000544429 FARSAQ9Y285 508 aaKnown RBP18.21■□□□□ 0.51
DDX55-211ENST00000544429 ZNF891A8MT65 544 aaPredicted RBP18.2■□□□□ 0.5
DDX55-211ENST00000544429 FOXO6A8MYZ6 492 aa18.2■□□□□ 0.5
DDX55-211ENST00000544429 STX16-NPEPL1H3BU86 382 aa18.2■□□□□ 0.5
DDX55-211ENST00000544429 E2F3O00716 465 aa18.2■□□□□ 0.5
DDX55-211ENST00000544429 STX16O14662 325 aa18.2■□□□□ 0.5
DDX55-211ENST00000544429 FOXS1O43638 330 aa18.2■□□□□ 0.5
DDX55-211ENST00000544429 OR1F1O43749 312 aa18.2■□□□□ 0.5
DDX55-211ENST00000544429 CREG1O75629 220 aa18.2■□□□□ 0.5
DDX55-211ENST00000544429 PYGBP11216 843 aa18.2■□□□□ 0.5
DDX55-211ENST00000544429 CD22P20273 847 aa18.2■□□□□ 0.5
DDX55-211ENST00000544429 NFKB2Q00653 900 aa18.2■□□□□ 0.5
DDX55-211ENST00000544429 PWP1Q13610 501 aa18.2■□□□□ 0.5
DDX55-211ENST00000544429 ASPGQ86U10 573 aa18.2■□□□□ 0.5
DDX55-211ENST00000544429 RIBC1Q8N443 379 aaPredicted RBP18.2■□□□□ 0.5
DDX55-211ENST00000544429 ENDOVQ8N8Q3 282 aaKnown RBP18.2■□□□□ 0.5
DDX55-211ENST00000544429 ZSCAN1Q8NBB4 408 aa18.2■□□□□ 0.5
DDX55-211ENST00000544429 CAMKVQ8NCB2 501 aa18.2■□□□□ 0.5
DDX55-211ENST00000544429 NT5CQ8TCD5 201 aa18.2■□□□□ 0.5
DDX55-211ENST00000544429 ROPN1BQ9BZX4 212 aaPredicted RBP18.2■□□□□ 0.5
DDX55-211ENST00000544429 ROPN1Q9HAT0 212 aaPredicted RBP18.2■□□□□ 0.5
DDX55-211ENST00000544429 MRPS2Q9Y399 296 aaKnown RBP18.2■□□□□ 0.5
DDX55-211ENST00000544429 ZFYVE26Q68DK2 2539 aa18.2■□□□□ 0.5
DDX55-211ENST00000544429 CHD6Q8TD26 2715 aa18.19■□□□□ 0.5
DDX55-211ENST00000544429 IGLV3-12A0A075B6K2 115 aa18.19■□□□□ 0.5
DDX55-211ENST00000544429 LRRC14BA6NHZ5 514 aa18.19■□□□□ 0.5
DDX55-211ENST00000544429 GOLGA8RI6L899 631 aa18.19■□□□□ 0.5
DDX55-211ENST00000544429 NKX2-8O15522 239 aa18.19■□□□□ 0.5
DDX55-211ENST00000544429 CCNT2O60583 730 aaKnown RBP18.19■□□□□ 0.5
DDX55-211ENST00000544429 ALBP02768 609 aa18.19■□□□□ 0.5
DDX55-211ENST00000544429 GFAPP14136 432 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms