RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 TMEM150CB9EJG8 249 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 SOCS5O75159 536 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 ITGBL1O95965 494 aaPredicted RBP7.6□□□□□ -1.19
VPS13D-211ENST00000543710 HLA-DPB1P04440 258 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 S100A6P06703 90 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 ANXA2P07355 339 aaKnown RBP7.6□□□□□ -1.19
VPS13D-211ENST00000543710 RPL10P27635 214 aaKnown RBP7.6□□□□□ -1.19
VPS13D-211ENST00000543710 XKP51811 444 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 ABHD18Q0P651 414 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 RUNX3Q13761 415 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 RCAN2Q14206 197 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 IL23RQ5VWK5 629 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 CES3Q6UWW8 571 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 SERPINA9Q86WD7 417 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 SPAG16Q8N0X2 631 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 FITM2Q8N6M3 262 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 NPLOC4Q8TAT6 608 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 KCNN1Q92952 543 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 TAMM41Q96BW9 452 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 LRRC58Q96CX6 371 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 AIFM2Q9BRQ8 373 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 UCK2Q9BZX2 261 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 MOCS1Q9NZB8 636 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 FLRT1Q9NZU1 646 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 OARD1Q9Y530 152 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 FABP12A6NFH5 140 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 NRP1O14786 923 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 PIP5K1BO14986 540 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 CORO1AP31146 461 aaKnown RBP7.6□□□□□ -1.19
VPS13D-211ENST00000543710 NRG3P56975 720 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 MRPS21P82921 87 aaKnown RBP7.6□□□□□ -1.19
VPS13D-211ENST00000543710 GALNT2Q10471 571 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 MAB21L1Q13394 359 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 UGCGQ16739 394 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 ARHGAP12Q8IWW6 846 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 CMASQ8NFW8 434 aaPredicted RBP7.6□□□□□ -1.19
VPS13D-211ENST00000543710 RFT1Q96AA3 541 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 CCDC106Q9BWC9 280 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 PIF1Q9H611 641 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 TCF7L1Q9HCS4 588 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 PNMA8BQ9ULN7 279 aaPredicted RBP7.6□□□□□ -1.19
VPS13D-211ENST00000543710 FKBP7Q9Y680 259 aa7.6□□□□□ -1.19
VPS13D-211ENST00000543710 EPHB6O15197 1021 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 NUAK1O60285 661 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 SNX4O95219 450 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 CTSAP10619 480 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 ACTA2P62736 377 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 ACTG2P63267 376 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 NFKB2Q00653 900 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 RTL6Q6ICC9 239 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 AADACL2Q6P093 401 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 CAMKVQ8NCB2 501 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 JOSD2Q8TAC2 188 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 DQX1Q8TE96 717 aaKnown RBP7.59□□□□□ -1.19
VPS13D-211ENST00000543710 EMID1Q96A84 441 aaPredicted RBP7.59□□□□□ -1.19
VPS13D-211ENST00000543710 ERLEC1Q96DZ1 483 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 C12orf65Q9H3J6 166 aaKnown RBP7.59□□□□□ -1.19
VPS13D-211ENST00000543710 FAM83DQ9H4H8 585 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 WASF3Q9UPY6 502 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 PCDHAC2Q9Y5I4 1007 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 SMIM28A0A1B0GU29 152 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 A0A1W2PRU2 124 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 NOBOXO60393 691 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 ATG12O94817 140 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 NCBP2-AS2Q69YL0 99 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 NCEH1Q6PIU2 408 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 DCDC5Q6ZRR9 648 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 BNIPLQ7Z465 357 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 OR10G2Q8NGC3 310 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 SGCDQ92629 289 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 ALG3Q92685 438 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 SLC45A3Q96JT2 553 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 SUSD3Q96L08 255 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 ZNF717Q9BY31 904 aaPredicted RBP7.59□□□□□ -1.19
VPS13D-211ENST00000543710 SLA2Q9H6Q3 261 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 GPR34Q9UPC5 381 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 ENPP3O14638 875 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 ARPC2O15144 300 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 SCGB2A1O75556 95 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 CHRNB4P30926 498 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 CTBP2P56545 445 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 SLC25A11Q02978 314 aaKnown RBP7.59□□□□□ -1.19
VPS13D-211ENST00000543710 MAPK14Q16539 360 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 MBLAC2Q68D91 279 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 FAM151BQ6UXP7 276 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 SLC43A2Q8N370 569 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 SDR16C5Q8N3Y7 309 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 OR5B17Q8NGF7 314 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 CLEC4DQ8WXI8 215 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 RAD51AP1Q96B01 352 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 GPR21Q99679 349 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 COPS4Q9BT78 406 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 MRPS30Q9NP92 439 aaKnown RBP7.59□□□□□ -1.19
VPS13D-211ENST00000543710 LATO43561 262 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 LAMP2P13473 410 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 SLC6A6P31641 620 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 RGS8P57771 180 aaPredicted RBP7.59□□□□□ -1.19
VPS13D-211ENST00000543710 GBX1Q14549 363 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 CLCA4Q14CN2 919 aa7.59□□□□□ -1.19
VPS13D-211ENST00000543710 LRRC26Q2I0M4 334 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms