RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 SLC25A3Q00325 362 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 E2F1Q01094 437 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 LMAN2Q12907 356 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 TRAF3Q13114 568 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 SLC13A2Q13183 592 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ILKQ13418 452 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 GK3PQ14409 553 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 USP10Q14694 798 aaKnown RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 PCBP1Q15365 356 aaKnown RBP eCLIP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 CHRNA6Q15825 494 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 CCDC142Q17RM4 750 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 MSMPQ1L6U9 139 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ALG11Q2TAA5 492 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 CHRFAM7AQ494W8 412 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ATP13A4Q4VNC1 1196 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 PAN3Q58A45 887 aaKnown RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 Q5BKY6 102 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 LIPNQ5VXI9 398 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ANKRD22Q5VYY1 191 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 TTC23Q5W5X9 447 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ZNF772Q68DY9 489 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 BICRALQ6AI39 1079 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 OR5M10Q6IEU7 315 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 TAF2Q6P1X5 1199 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 DARS2Q6PI48 645 aaKnown RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 CLEC2AQ6UVW9 174 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 LIPIQ6XZB0 460 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 C1orf122Q6ZSJ8 110 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 SH2D5Q6ZV89 423 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 STRADAQ7RTN6 431 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 PIWIL3Q7Z3Z3 882 aaKnown RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 BMP8AQ7Z5Y6 402 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 CAMKMTQ7Z624 323 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 SPRED1Q7Z699 444 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 DPPA2Q7Z7J5 298 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 SGMS1Q86VZ5 419 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 PHF13Q86YI8 300 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 CPNE8Q86YQ8 564 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 SLC13A5Q86YT5 568 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ZDHHC17Q8IUH5 632 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 PLD3Q8IV08 490 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 AQP12AQ8IXF9 295 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ADGRF4Q8IZF3 695 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ABI1Q8IZP0 508 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 RDH10Q8IZV5 341 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 GUF1Q8N442 669 aaKnown RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 CNTD1Q8N815 330 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 FBXO15Q8NCQ5 510 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ADPRHL1Q8NDY3 354 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 HIPK4Q8NE63 616 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 OR2L5Q8NG80 312 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 OR4M1Q8NGD0 313 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 AKR7LQ8NHP1 331 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 MOSPD2Q8NHP6 518 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 MCFD2Q8NI22 146 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 WDR36Q8NI36 951 aaKnown RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 PCDH19Q8TAB3 1148 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 HTR3CQ8WXA8 447 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ATG4AQ8WYN0 398 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 CPT1BQ92523 772 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 PIGKQ92643 395 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 HAS1Q92839 578 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ZNF566Q969W8 418 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 KIAA1143Q96AT1 154 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 EXOSC8Q96B26 276 aaKnown RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 CCDC124Q96CT7 223 aaKnown RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ECHDC3Q96DC8 303 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 RNF31Q96EP0 1072 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ZC3HAV1LQ96H79 300 aaKnown RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 KAZALD1Q96I82 304 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 SORCS2Q96PQ0 1159 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 SLITRK1Q96PX8 696 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 TRNT1Q96Q11 434 aaKnown RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 NODALQ96S42 347 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 PFDN5Q99471 154 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 CDCA3Q99618 268 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 APOL2Q9BQE5 337 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ZNF559Q9BR84 538 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 COPS4Q9BT78 406 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 HTATIP2Q9BUP3 242 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 FRMD8P1Q9BZ68 369 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ZNF436Q9C0F3 470 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 SLIRPQ9GZT3 109 aaKnown RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 SEMA6AQ9H2E6 1030 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 GAL3ST2Q9H3Q3 398 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 KAT8Q9H7Z6 458 aaKnown RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 NT5DC2Q9H857 520 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 AGO3Q9H9G7 860 aaKnown RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 KCNK12Q9HB15 430 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 C3orf14Q9HBI5 128 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 GLOD4Q9HC38 313 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 PCDH9Q9HC56 1237 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 TCF7L1Q9HCS4 588 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 SPAG4Q9NPE6 437 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 NIT2Q9NQR4 276 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 PRMT8Q9NR22 394 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 ANKEF1Q9NU02 776 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 FBXL12Q9NXK8 326 aa4.21□□□□□ -1.74
SNHG1-219ENST00000542112 SMPD3Q9NY59 655 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-219ENST00000542112 RDH8Q9NYR8 311 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms