RNA–Protein interactions for RNA: ENST00000541959.5

ARF3-208, Transcript of ADP ribosylation factor 3, human

APPRIS P1 TSL 5 BASIC

Gene ARF3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARF3-208	ENST00000541959	MACROD1	Q9BQ69	325 aa		18.72	■□□□□ 0.59
ARF3-208	ENST00000541959	YIPF2	Q9BWQ6	316 aa		18.72	■□□□□ 0.59
ARF3-208	ENST00000541959	PRM3	Q9NNZ6	103 aa		18.72	■□□□□ 0.59
ARF3-208	ENST00000541959	DNAJC11	Q9NVH1	559 aa		18.72	■□□□□ 0.59
ARF3-208	ENST00000541959	TCFL5	Q9UL49	500 aa		18.72	■□□□□ 0.59
ARF3-208	ENST00000541959	PTRH2	Q9Y3E5	179 aa	Known RBP	18.72	■□□□□ 0.59
ARF3-208	ENST00000541959	SYCE1L	A8MT33	242 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	LCMT2	O60294	686 aa	Known RBP	18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	STK16	O75716	305 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	IPO13	O94829	963 aa	Known RBP	18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	MED26	O95402	600 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	GFAP	P14136	432 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	GCGR	P47871	477 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	SLC6A12	P48065	614 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	KCNC1	P48547	511 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	VSNL1	P62760	191 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	RELA	Q04206	551 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	CDC16	Q13042	620 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	RBBP5	Q15291	538 aa	Known RBP	18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	NDUFA9	Q16795	377 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	BORA	Q6PGQ7	559 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	NXPE4	Q6UWF7	544 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	ZNF605	Q86T29	641 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	ASPG	Q86U10	573 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	PDPR	Q8NCN5	879 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	ZNF740	Q8NDX6	193 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	ABHD11	Q8NFV4	315 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	ZCCHC10	Q8TBK6	192 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	THAP11	Q96EK4	314 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	ATOH8	Q96SQ7	321 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	AIF1L	Q9BQI0	150 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	DHRS4	Q9BTZ2	278 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	PELI2	Q9HAT8	420 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	ZNF358	Q9NW07	568 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	CPSF2	Q9P2I0	782 aa	Known RBP	18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	POLH	Q9Y253	713 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	CCDC88C	Q9P219	2028 aa		18.71	■□□□□ 0.59
ARF3-208	ENST00000541959	IQANK1	A0A1B0GTG1	560 aa		18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	SMIM23	A6NLE4	172 aa		18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	CLGN	O14967	610 aa		18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	FURIN	P09958	794 aa		18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	FBL	P22087	321 aa	Known RBP	18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	GCA	P28676	217 aa		18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	OTX2	P32243	289 aa		18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	DEK	P35659	375 aa	Known RBP	18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	FOLR3	P41439	243 aa		18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	FOXL2	P58012	376 aa		18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	IL10RA	Q13651	578 aa		18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	ACAP2	Q15057	778 aa		18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	CRTC2	Q53ET0	693 aa	Predicted RBP	18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	CDKL4	Q5MAI5	379 aa		18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	VN1R4	Q7Z5H5	301 aa		18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	PLD6	Q8N2A8	252 aa	Known RBP	18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	MFSD9	Q8NBP5	474 aa		18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	CAMKV	Q8NCB2	501 aa		18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	SLC13A3	Q8WWT9	602 aa		18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	MMAB	Q96EY8	250 aa	Predicted RBP	18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	SPNS1	Q9H2V7	528 aa		18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	EPB41L4B	Q9H329	900 aa		18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	ZNF304	Q9HCX3	659 aa		18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	TBK1	Q9UHD2	729 aa		18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	PTBP2	Q9UKA9	531 aa	Known RBP	18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	CDC14A	Q9UNH5	594 aa		18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	MAN2B2	Q9Y2E5	1009 aa		18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	BSN	Q9UPA5	3926 aa		18.7	■□□□□ 0.58
ARF3-208	ENST00000541959	TRBC2	A0A5B9	178 aa		18.69	■□□□□ 0.58
ARF3-208	ENST00000541959	H2AFY	O75367	372 aa	Known RBP	18.69	■□□□□ 0.58
ARF3-208	ENST00000541959	SLC35G6	P0C7Q6	338 aa		18.69	■□□□□ 0.58
ARF3-208	ENST00000541959	SFTPC	P11686	197 aa		18.69	■□□□□ 0.58
ARF3-208	ENST00000541959	GNAZ	P19086	355 aa		18.69	■□□□□ 0.58
ARF3-208	ENST00000541959	ITGAX	P20702	1163 aa		18.69	■□□□□ 0.58
ARF3-208	ENST00000541959	VARS	P26640	1264 aa	Known RBP	18.69	■□□□□ 0.58
ARF3-208	ENST00000541959	AGTR2	P50052	363 aa		18.69	■□□□□ 0.58
ARF3-208	ENST00000541959	CSRP3	P50461	194 aa		18.69	■□□□□ 0.58
ARF3-208	ENST00000541959	REEP5	Q00765	189 aa		18.69	■□□□□ 0.58
ARF3-208	ENST00000541959	GARNL3	Q5VVW2	1013 aa		18.69	■□□□□ 0.58
ARF3-208	ENST00000541959	PRMT9	Q6P2P2	845 aa		18.69	■□□□□ 0.58
ARF3-208	ENST00000541959	ADGRD1	Q6QNK2	874 aa		18.69	■□□□□ 0.58
ARF3-208	ENST00000541959	KLHDC8A	Q8IYD2	350 aa		18.69	■□□□□ 0.58
ARF3-208	ENST00000541959	RHEBL1	Q8TAI7	183 aa		18.69	■□□□□ 0.58
ARF3-208	ENST00000541959	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	18.69	■□□□□ 0.58	2e-8	■■■■■ 72.2
ARF3-208	ENST00000541959	ISL2	Q96A47	359 aa		18.69	■□□□□ 0.58
ARF3-208	ENST00000541959	DRC3	Q9H069	523 aa		18.69	■□□□□ 0.58
ARF3-208	ENST00000541959	SLC22A11	Q9NSA0	550 aa		18.69	■□□□□ 0.58
ARF3-208	ENST00000541959	KCNE1B	A0A087WTH5	132 aa		18.68	■□□□□ 0.58
ARF3-208	ENST00000541959		A0A0A6YYC8	382 aa	Predicted RBP	18.68	■□□□□ 0.58
ARF3-208	ENST00000541959		B8ZZF3	427 aa		18.68	■□□□□ 0.58
ARF3-208	ENST00000541959		I3L1I5	382 aa	Predicted RBP	18.68	■□□□□ 0.58
ARF3-208	ENST00000541959	FFAR3	O14843	346 aa		18.68	■□□□□ 0.58
ARF3-208	ENST00000541959	GPR42	O15529	346 aa		18.68	■□□□□ 0.58
ARF3-208	ENST00000541959	PRPF4	O43172	522 aa	Known RBP eCLIP	18.68	■□□□□ 0.58	3e-8	■□□□□ 11.2
ARF3-208	ENST00000541959	NDUFS4	O43181	175 aa		18.68	■□□□□ 0.58
ARF3-208	ENST00000541959	SHBG	P04278	402 aa		18.68	■□□□□ 0.58
ARF3-208	ENST00000541959	CD63	P08962	238 aa		18.68	■□□□□ 0.58
ARF3-208	ENST00000541959	C1GALT1C1L	P0DN25	315 aa		18.68	■□□□□ 0.58
ARF3-208	ENST00000541959	GGT5	P36269	586 aa		18.68	■□□□□ 0.58
ARF3-208	ENST00000541959	MAGEA12	P43365	314 aa		18.68	■□□□□ 0.58
ARF3-208	ENST00000541959	CCR10	P46092	362 aa		18.68	■□□□□ 0.58
ARF3-208	ENST00000541959	SLBP	Q14493	270 aa	Known RBP eCLIP	18.68	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 199.5 ms