RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 TRAF4Q9BUZ4 470 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-217ENST00000541578 IDI2Q9BXS1 227 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 OLFML3Q9NRN5 406 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 SERINC1Q9NRX5 453 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 INTS10Q9NVR2 710 aaKnown RBP3.96□□□□□ -1.78
SNHG1-217ENST00000541578 SLCO1C1Q9NYB5 712 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 HMG20BQ9P0W2 317 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 KLHL9Q9P2J3 617 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 EPS15L1Q9UBC2 864 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 SIX4Q9UIU6 781 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 APPL1Q9UKG1 709 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 TMCC3Q9ULS5 477 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 RUVBL2Q9Y230 463 aaKnown RBP3.96□□□□□ -1.78
SNHG1-217ENST00000541578 VDAC3Q9Y277 283 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 PCDHGB1Q9Y5G3 927 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 TAF1P21675 1872 aa3.96□□□□□ -1.78
SNHG1-217ENST00000541578 TTC21BQ7Z4L5 1316 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 CPSF1Q10570 1443 aaKnown RBP3.95□□□□□ -1.78
SNHG1-217ENST00000541578 SLIT3O75094 1523 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 KIF13BQ9NQT8 1826 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 QRICH2Q9H0J4 1663 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 FAM208AQ9UK61 1670 aaKnown RBP3.95□□□□□ -1.78
SNHG1-217ENST00000541578 PXDNLA1KZ92 1463 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 A0A0G2JLW4 131 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 A0A0U1RQJ8 604 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 A0A1W2PP11 408 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 A0A1W2PRB8 838 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 FAM149AA5PLN7 773 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 ATP9AO75110 1047 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 PRDM1O75626 825 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 GSRP00390 522 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 LIPFP07098 398 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 FAM106CPP0CH98 169 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 HAPLN1P10915 354 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-217ENST00000541578 FCGR1AP12314 374 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 CSF2RAP15509 400 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 ARF4P18085 180 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-217ENST00000541578 S1PR1P21453 382 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 JAK1P23458 1154 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 GAS1P54826 345 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 ISL1P61371 349 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 CX3CL1P78423 397 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 SULT2A1Q06520 285 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 ZNF234Q14588 700 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 SLC39A14Q15043 492 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 NPTX1Q15818 432 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 IZUMO4Q1ZYL8 232 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 AARDQ4LEZ3 155 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 LBHQ53QV2 105 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-217ENST00000541578 CYB5D1Q6P9G0 228 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 SLC27A1Q6PCB7 646 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 PACS1Q6VY07 963 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 LONP2Q86WA8 852 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 CNTN4Q8IWV2 1026 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 ARL6IP6Q8N6S5 226 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 THAP8Q8NA92 274 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 NOA1Q8NC60 698 aaKnown RBP3.95□□□□□ -1.78
SNHG1-217ENST00000541578 CCDC110Q8TBZ0 833 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 RNF128Q8TEB7 428 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 FAM216AQ8WUB2 273 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 CKAP2Q8WWK9 683 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 SLC13A3Q8WWT9 602 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 SEPT1Q8WYJ6 367 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 TANKQ92844 425 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 DHX58Q96C10 678 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 PYCR2Q96C36 320 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 SGF29Q96ES7 293 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 TMEM19Q96HH6 336 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 ABHD8Q96I13 439 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 PCYT2Q99447 389 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 NAP1L3Q99457 506 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-217ENST00000541578 RAD9AQ99638 391 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 OSBPL8Q9BZF1 889 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 TRPC7Q9HCX4 862 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 GSN-AS1Q9NRJ2 163 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 PKD2L2Q9NZM6 624 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 C1RLQ9NZP8 487 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 B3GAT1Q9P2W7 334 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 MAD2L2Q9UI95 211 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 STRAPQ9Y3F4 350 aaKnown RBP3.95□□□□□ -1.78
SNHG1-217ENST00000541578 TMED3Q9Y3Q3 217 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 PCDHGA1Q9Y5H4 931 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 PDE4DIPQ5VU43 2346 aa3.95□□□□□ -1.78
SNHG1-217ENST00000541578 CENPJQ9HC77 1338 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-217ENST00000541578 N4BP2Q86UW6 1770 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-217ENST00000541578 C5P01031 1676 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 DICER1Q9UPY3 1922 aaKnown RBP3.94□□□□□ -1.78
SNHG1-217ENST00000541578 ILVBLA1L0T0 632 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 CAPN9O14815 690 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 ATP6V1G1O75348 118 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 CLDN14O95500 239 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 GAS8O95995 478 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 MOCS2O96007 188 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-217ENST00000541578 CYP2A7P20853 494 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 CD27P26842 260 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 TIA1P31483 386 aaKnown RBP eCLIP3.94□□□□□ -1.784e-6■■■■□ 22.9
SNHG1-217ENST00000541578 RFC4P35249 363 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 IER3P46695 156 aa3.94□□□□□ -1.78
SNHG1-217ENST00000541578 SERPINH1P50454 418 aaKnown RBP3.94□□□□□ -1.78
SNHG1-217ENST00000541578 PDLIM4P50479 330 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms