RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 SAV1Q9H4B6 383 aaPredicted RBP14.96□□□□□ -0.01
HMGA2-210ENST00000541363 LRRC7Q96NW7 1537 aa14.96□□□□□ -0.01
HMGA2-210ENST00000541363 ENPP3O14638 875 aa14.96□□□□□ -0.01
HMGA2-210ENST00000541363 AP2A1O95782 977 aa14.96□□□□□ -0.01
HMGA2-210ENST00000541363 CAMLGP49069 296 aa14.96□□□□□ -0.01
HMGA2-210ENST00000541363 ZFPM1Q8IX07 1006 aa14.96□□□□□ -0.01
HMGA2-210ENST00000541363 ACSS2Q9NR19 701 aa14.96□□□□□ -0.01
HMGA2-210ENST00000541363 DERAQ9Y315 318 aa14.96□□□□□ -0.01
HMGA2-210ENST00000541363 DPP6P42658 865 aa14.96□□□□□ -0.02
HMGA2-210ENST00000541363 IRF5Q13568 498 aa14.96□□□□□ -0.02
HMGA2-210ENST00000541363 RAB31Q13636 194 aa14.96□□□□□ -0.02
HMGA2-210ENST00000541363 AKR1C8PQ5T2L2 129 aa14.96□□□□□ -0.02
HMGA2-210ENST00000541363 UNQ6126/PRO20091Q6UXV3 157 aa14.96□□□□□ -0.02
HMGA2-210ENST00000541363 AMZ2Q86W34 360 aa14.96□□□□□ -0.02
HMGA2-210ENST00000541363 BCAS3Q9H6U6 928 aa14.96□□□□□ -0.02
HMGA2-210ENST00000541363 FZD4Q9ULV1 537 aa14.96□□□□□ -0.02
HMGA2-210ENST00000541363 TCAF1Q9Y4C2 921 aa14.96□□□□□ -0.02
HMGA2-210ENST00000541363 PCDHB14Q9Y5E9 798 aa14.96□□□□□ -0.02
HMGA2-210ENST00000541363 NBPF12Q5TAG4 269 aaPredicted RBP14.96□□□□□ -0.02
HMGA2-210ENST00000541363 PRELID2Q8N945 189 aa14.96□□□□□ -0.02
HMGA2-210ENST00000541363 LRRN4CLQ8ND94 238 aa14.96□□□□□ -0.02
HMGA2-210ENST00000541363 OR5M3Q8NGP4 307 aa14.96□□□□□ -0.02
HMGA2-210ENST00000541363 ARL5BQ96KC2 179 aa14.96□□□□□ -0.02
HMGA2-210ENST00000541363 YDJCA8MPS7 323 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 GMDSO60547 372 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 MT-CYBP00156 380 aaPredicted RBP14.95□□□□□ -0.02
HMGA2-210ENST00000541363 TNFP01375 233 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 AGTR1P30556 359 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 SLC18A2Q05940 514 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 MFSD13AQ14CX5 517 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 CARD16Q5EG05 197 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 TLR6Q9Y2C9 796 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 BLOC1S5-TXNDC5H3BN57 136 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 QPCTQ16769 361 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 AQP11Q8NBQ7 271 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 FRZBQ92765 325 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 LENG8Q96PV6 779 aaPredicted RBP14.95□□□□□ -0.02
HMGA2-210ENST00000541363 TMEM109Q9BVC6 243 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 COPZ2Q9P299 210 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 MPPED1O15442 326 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 ZBED5Q49AG3 693 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 ZNF529Q6P280 563 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 DCBLD1Q8N8Z6 715 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 COL21A1Q96P44 957 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 C19orf25Q9UFG5 118 aaPredicted RBP14.95□□□□□ -0.02
HMGA2-210ENST00000541363 TSTD3H0UI37 97 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 ERCC1P07992 297 aaPredicted RBP14.95□□□□□ -0.02
HMGA2-210ENST00000541363 ZNF136P52737 540 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 ST3GAL3Q11203 375 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 C9orf57Q5W0N0 161 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 ERN2Q76MJ5 926 aaKnown RBP14.95□□□□□ -0.02
HMGA2-210ENST00000541363 ZNF781Q8N8C0 355 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 NR4A3Q92570 626 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 C12orf65Q9H3J6 166 aaKnown RBP14.95□□□□□ -0.02
HMGA2-210ENST00000541363 MRM3Q9HC36 420 aaKnown RBP14.95□□□□□ -0.02
HMGA2-210ENST00000541363 DLGAP1O14490 977 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 NDUFS4O43181 175 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 CREBL2O60519 120 aaPredicted RBP14.95□□□□□ -0.02
HMGA2-210ENST00000541363 OR1D2P34982 312 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 DAG1Q14118 895 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 LRRC32Q14392 662 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 SPATC1Q76KD6 591 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 DPY19L4Q7Z388 723 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 NUDT13Q86X67 352 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 NDRG2Q9UN36 371 aaKnown RBP14.95□□□□□ -0.02
HMGA2-210ENST00000541363 CNTNAP1P78357 1384 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 ZNF850A8MQ14 1090 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 XPNPEP2O43895 674 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 ZNF84P51523 738 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 CCL23P55773 120 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 DSC3Q14574 896 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 TAF1AQ15573 450 aaPredicted RBP14.95□□□□□ -0.02
HMGA2-210ENST00000541363 BAIAP2L2Q6UXY1 529 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 C3P1Q6ZMU1 363 aa14.95□□□□□ -0.02
HMGA2-210ENST00000541363 LDB1Q86U70 411 aaPredicted RBP14.94□□□□□ -0.02
HMGA2-210ENST00000541363 CAMKVQ8NCB2 501 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 CSNK2A2P19784 350 aaPredicted RBP14.94□□□□□ -0.02
HMGA2-210ENST00000541363 PTGER3P43115 390 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 LEPRP48357 1165 aaKnown RBP14.94□□□□□ -0.02
HMGA2-210ENST00000541363 HNRNPKP61978 463 aaKnown RBP eCLIP14.94□□□□□ -0.02
HMGA2-210ENST00000541363 DUSP9Q99956 384 aaKnown RBP14.94□□□□□ -0.02
HMGA2-210ENST00000541363 TPT1P8Q9HAU6 139 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 CNTN3Q9P232 1028 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 REV1Q9UBZ9 1251 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 ZFP37Q9Y6Q3 630 aaPredicted RBP14.94□□□□□ -0.02
HMGA2-210ENST00000541363 GLI2P10070 1586 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 FLRT2O43155 660 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 MATN1P21941 496 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 IDH3GP51553 393 aaPredicted RBP14.94□□□□□ -0.02
HMGA2-210ENST00000541363 RPL7AP62424 266 aaKnown RBP14.94□□□□□ -0.02
HMGA2-210ENST00000541363 CDNFQ49AH0 187 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 TMEM35AQ53FP2 167 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 PPM1JQ5JR12 505 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 VSTM1Q6UX27 236 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 CXCL17Q6UXB2 119 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 TOR1AIP2Q8NFQ8 470 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 TRMT10AQ8TBZ6 339 aaKnown RBP14.94□□□□□ -0.02
HMGA2-210ENST00000541363 KCNJ9Q92806 393 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 MAN2C1Q9NTJ4 1040 aa14.94□□□□□ -0.02
HMGA2-210ENST00000541363 GPRC5BQ9NZH0 403 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms