RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 KRT78Q8N1N4 520 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 ARL14Q8N4G2 192 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 LILRA3Q8N6C8 439 aaPredicted RBP5.53□□□□□ -1.52
CDKN3-206ENST00000541304 PNPLA1Q8N8W4 532 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 OR52E1Q8NGJ3 308 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 OR6Y1Q8NGX8 325 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 CFAP61Q8NHU2 1237 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 CCL4L1Q8NHW4 92 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 ZNF483Q8TF39 744 aaPredicted RBP5.53□□□□□ -1.52
CDKN3-206ENST00000541304 ZNF480Q8WV37 535 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 WDR34Q96EX3 536 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 PTCD3Q96EY7 689 aaKnown RBP5.53□□□□□ -1.52
CDKN3-206ENST00000541304 ZDHHC12Q96GR4 267 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 METTL2AQ96IZ6 378 aaKnown RBP5.53□□□□□ -1.52
CDKN3-206ENST00000541304 TMEM237Q96Q45 408 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 DIRC2Q96SL1 478 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 PKP4Q99569 1192 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 PAIP2Q9BPZ3 127 aaKnown RBP5.53□□□□□ -1.52
CDKN3-206ENST00000541304 HGH1Q9BTY7 390 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 NTMT1Q9BV86 223 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 GTPBP2Q9BX10 602 aaKnown RBP5.53□□□□□ -1.52
CDKN3-206ENST00000541304 ILKAPQ9H0C8 392 aaPredicted RBP5.53□□□□□ -1.52
CDKN3-206ENST00000541304 PELI2Q9HAT8 420 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 SEMA4GQ9NTN9 838 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 GPATCH2Q9NW75 528 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 ZNF624Q9P2J8 865 aaPredicted RBP5.53□□□□□ -1.52
CDKN3-206ENST00000541304 VTI1BQ9UEU0 232 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 TRPS1Q9UHF7 1281 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 DUSP13Q9UII6 198 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 HAO1Q9UJM8 370 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 PCTPQ9UKL6 214 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 PNMA8BQ9ULN7 279 aaPredicted RBP5.53□□□□□ -1.52
CDKN3-206ENST00000541304 PADI4Q9UM07 663 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 PPT2Q9UMR5 302 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 PSMD13Q9UNM6 376 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 WDR37Q9Y2I8 494 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 TDRKHQ9Y2W6 561 aaKnown RBP5.53□□□□□ -1.52
CDKN3-206ENST00000541304 RAP2CQ9Y3L5 183 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 TSC22D4Q9Y3Q8 395 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 PCYT1BQ9Y5K3 369 aaPredicted RBP5.53□□□□□ -1.52
CDKN3-206ENST00000541304 SLCO1B1Q9Y6L6 691 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 PCDH15Q96QU1 1955 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 NCOR1O75376 2440 aa5.53□□□□□ -1.52
CDKN3-206ENST00000541304 MN1Q10571 1320 aaPredicted RBP5.52□□□□□ -1.53
CDKN3-206ENST00000541304 TTC28Q96AY4 2481 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 PIPSLA2A3N6 862 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 OR5K3A6NET4 321 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 TLCD2A6NGC4 264 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 NCF1BA6NI72 391 aaPredicted RBP5.52□□□□□ -1.53
CDKN3-206ENST00000541304 TRPC5OSA6NMA1 111 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 NCF1CA8MVU1 366 aaPredicted RBP5.52□□□□□ -1.53
CDKN3-206ENST00000541304 TMX2-CTNND1H3BSU7 103 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 TXNDC9O14530 226 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 CCNT2O60583 730 aaKnown RBP5.52□□□□□ -1.53
CDKN3-206ENST00000541304 SHOX2O60902 331 aaPredicted RBP5.52□□□□□ -1.53
CDKN3-206ENST00000541304 SNNO75324 88 aaPredicted RBP5.52□□□□□ -1.53
CDKN3-206ENST00000541304 VPS4BO75351 444 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 CRCPO75575 148 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 UBXN7O94888 489 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 WDR47O94967 919 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 CLDN9O95484 217 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 ESRRBO95718 433 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 HSPA4LO95757 839 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 GUCA1CO95843 209 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 TOP3BO95985 862 aaKnown RBP5.52□□□□□ -1.53
CDKN3-206ENST00000541304 KRT6AP02538 564 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 HPXP02790 462 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 KRT6BP04259 564 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 FGF4P08620 206 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 CHRM5P08912 532 aaPredicted RBP5.52□□□□□ -1.53
CDKN3-206ENST00000541304 SBK3P0C264 359 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 ANKRD34CP0C6C1 535 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 MSL3P1P0C860 447 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 TROVE2P10155 538 aaKnown RBP eCLIP5.52□□□□□ -1.53
CDKN3-206ENST00000541304 FGF3P11487 239 aaPredicted RBP5.52□□□□□ -1.53
CDKN3-206ENST00000541304 HSD3B1P14060 373 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 NCF1P14598 390 aaPredicted RBP5.52□□□□□ -1.53
CDKN3-206ENST00000541304 EZRP15311 586 aaKnown RBP5.52□□□□□ -1.53
CDKN3-206ENST00000541304 CREB1P16220 341 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 CKMT2P17540 419 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 ACP1P24666 158 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 HSD3B2P26439 372 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 SLC1A6P48664 564 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 KRT6CP48668 564 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 CCNG1P51959 295 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 ARFIP1P53367 373 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 NAGLUP54802 743 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 ABCE1P61221 599 aaKnown RBP5.52□□□□□ -1.53
CDKN3-206ENST00000541304 SKP1P63208 163 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 PRDX1Q06830 199 aaKnown RBP5.52□□□□□ -1.53
CDKN3-206ENST00000541304 C1orf61Q13536 156 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 NAE1Q13564 534 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 TRA2AQ13595 282 aaKnown RBP eCLIP5.52□□□□□ -1.53
CDKN3-206ENST00000541304 MPP2Q14168 576 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 GPR18Q14330 331 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 GRB7Q14451 532 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 SHBQ15464 509 aa5.52□□□□□ -1.53
CDKN3-206ENST00000541304 HIST2H2ACQ16777 129 aaPredicted RBP5.52□□□□□ -1.53
CDKN3-206ENST00000541304 AASDHQ4L235 1098 aaPredicted RBP5.52□□□□□ -1.53
CDKN3-206ENST00000541304 ZNF542PQ5EBM4 170 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms