RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 UPK3BL2E5RIL1 263 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 FAM20BO75063 409 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 HIST1H2AGP0C0S8 130 aaPredicted RBP12.1□□□□□ -0.47
RNF4-222ENST00000541204 CEBPBP17676 345 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 HIST1H2ADP20671 130 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 TGM1P22735 817 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 AOAHP28039 575 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 HOXA9P31269 272 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 BMPR1AP36894 532 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 ST13P50502 369 aaKnown RBP12.1□□□□□ -0.47
RNF4-222ENST00000541204 METAP1P53582 386 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 VLDLRP98155 873 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 ABRQ12979 859 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 MAPK11Q15759 364 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 PTCHD3Q3KNS1 767 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 LILRA3Q8N6C8 439 aaPredicted RBP12.1□□□□□ -0.47
RNF4-222ENST00000541204 C12orf76Q8N812 135 aaPredicted RBP12.1□□□□□ -0.47
RNF4-222ENST00000541204 OR6Q1Q8NGQ2 317 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 APIPQ96GX9 242 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 ABHD8Q96I13 439 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 HIST1H2AHQ96KK5 128 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 HIST1H2AJQ99878 128 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 P2RY13Q9BPV8 354 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 BCL7BQ9BQE9 202 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 HEPHQ9BQS7 1158 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 H2AFJQ9BTM1 129 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 WRAP53Q9BUR4 548 aaKnown RBP12.1□□□□□ -0.47
RNF4-222ENST00000541204 BTBD2Q9BX70 525 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 ELOVL6Q9H5J4 265 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 ZDHHC4Q9NPG8 344 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 ACOT13Q9NPJ3 140 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 FBXO8Q9NRD0 319 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 SACM1LQ9NTJ5 587 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 THG1LQ9NWX6 298 aaKnown RBP12.1□□□□□ -0.47
RNF4-222ENST00000541204 SLC22A14Q9Y267 594 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 KIAA1671Q9BY89 1806 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 PABPN1LA6NDY0 278 aaKnown RBP12.1□□□□□ -0.47
RNF4-222ENST00000541204 COQ9O75208 318 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 SH3BGRLO75368 114 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 ARHGEF15O94989 841 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 SYN1P17600 705 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 PBLDP30039 288 aaPredicted RBP12.1□□□□□ -0.47
RNF4-222ENST00000541204 SERPINB10P48595 397 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 TMED10P49755 219 aaKnown RBP12.1□□□□□ -0.47
RNF4-222ENST00000541204 POLR2LP62875 67 aaKnown RBP12.1□□□□□ -0.47
RNF4-222ENST00000541204 GRIN2CQ14957 1233 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 HIST2H2ACQ16777 129 aaPredicted RBP12.1□□□□□ -0.47
RNF4-222ENST00000541204 INAVAQ3KP66 663 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 DSG4Q86SJ6 1040 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 SPPL3Q8TCT6 385 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 APOL4Q9BPW4 351 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 SLC29A3Q9BZD2 475 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 SLC32A1Q9H598 525 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 RDH14Q9HBH5 336 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 TM9SF3Q9HD45 589 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 GIN1Q9NXP7 522 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 KIF17Q9P2E2 1029 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 REV3LO60673 3130 aa12.1□□□□□ -0.47
RNF4-222ENST00000541204 A0A1W2PQ67 120 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 RGS10O43665 173 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 FABP3P05413 133 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 KRT20P35900 424 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 VIPR2P41587 438 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 PREPP48147 710 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 MAD2L1BPQ15013 274 aaPredicted RBP12.09□□□□□ -0.47
RNF4-222ENST00000541204 CATSPEREQ5SY80 951 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 PAGE2Q7Z2X7 111 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 HORMAD1Q86X24 394 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 CCDC71Q8IV32 467 aaPredicted RBP12.09□□□□□ -0.47
RNF4-222ENST00000541204 LGALS12Q96DT0 336 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 APOLD1Q96LR9 279 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 DPH2Q9BQC3 489 aaPredicted RBP12.09□□□□□ -0.47
RNF4-222ENST00000541204 EBPLQ9BY08 206 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 NDRG4Q9ULP0 352 aaKnown RBP12.09□□□□□ -0.47
RNF4-222ENST00000541204 WDR37Q9Y2I8 494 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 FADS2P1A8MWK0 482 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 EVPLLA8MZ36 301 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 PLK4O00444 970 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 KPNA3O00505 521 aaPredicted RBP12.09□□□□□ -0.47
RNF4-222ENST00000541204 AQP9O43315 295 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 CNOT3O75175 753 aaKnown RBP12.09□□□□□ -0.47
RNF4-222ENST00000541204 FKBP9O95302 570 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 LCKP06239 509 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 PRPS2P11908 318 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 DNAJA1P31689 397 aaKnown RBP12.09□□□□□ -0.47
RNF4-222ENST00000541204 NNMTP40261 264 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 CXCR4P61073 352 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 ZNF77Q15935 545 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 NEK5Q6P3R8 708 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 AHSA2Q719I0 299 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 C12orf40Q86WS4 652 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 ATG16L2Q8NAA4 619 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 HPS1Q92902 700 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 CEP44Q9C0F1 390 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 KRT84Q9NSB2 600 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 VPS4AQ9UN37 437 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 PPIL1Q9Y3C6 166 aa12.09□□□□□ -0.47
RNF4-222ENST00000541204 SAMHD1Q9Y3Z3 626 aaKnown RBP12.09□□□□□ -0.47
RNF4-222ENST00000541204 CLIC1O00299 241 aa12.08□□□□□ -0.48
RNF4-222ENST00000541204 KDM1AO60341 852 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms