RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 TTI1O43156 1089 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 ZNHIT1O43257 154 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 NIPSNAP2O75323 286 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 SLC16A8O95907 504 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 SP1P08047 785 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 ANXA5P08758 320 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 ESRRAP11474 423 aaPredicted RBP6.88□□□□□ -1.31
YBX3-209ENST00000540747 PKMP14618 531 aaKnown RBP6.88□□□□□ -1.31
YBX3-209ENST00000540747 CD1EP15812 388 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 PPARGP37231 505 aaPredicted RBP6.88□□□□□ -1.31
YBX3-209ENST00000540747 FDFT1P37268 417 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 PRAMEP78395 509 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 ABATP80404 500 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 HSF1Q00613 529 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 RHAGQ02094 409 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 ALDH6A1Q02252 535 aaKnown RBP6.88□□□□□ -1.31
YBX3-209ENST00000540747 TAP2Q03519 686 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 PTK6Q13882 451 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 BTBD16Q32M84 506 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 ANKRD20A4Q4UJ75 823 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 ACSBG2Q5FVE4 666 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 ZNF468Q5VIY5 522 aaPredicted RBP6.88□□□□□ -1.31
YBX3-209ENST00000540747 PTRHD1Q6GMV3 140 aaKnown RBP6.88□□□□□ -1.31
YBX3-209ENST00000540747 SPINK14Q6IE38 97 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 TMEM214Q6NUQ4 689 aaKnown RBP6.88□□□□□ -1.31
YBX3-209ENST00000540747 MEX3BQ6ZN04 569 aaKnown RBP6.88□□□□□ -1.31
YBX3-209ENST00000540747 OTOAQ7RTW8 1153 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 PDSS2Q86YH6 399 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 CEP97Q8IW35 865 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 ARMC10Q8N2F6 343 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 GHDCQ8N2G8 530 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 RAB42Q8N4Z0 105 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 DNAAF3Q8N9W5 541 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 OR9A4Q8NGU2 314 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 M1APQ8TC57 530 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 MAGEC3Q8TD91 643 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 ZNF480Q8WV37 535 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 ATG4AQ8WYN0 398 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 PKP4Q99569 1192 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 OLFM1Q99784 485 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 CXXC4Q9H2H0 198 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 GPAMQ9HCL2 828 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 LANCL2Q9NS86 450 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 GALPQ9UBC7 116 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 TAC3Q9UHF0 121 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 PCYOX1Q9UHG3 505 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 NPIPA1Q9UND3 350 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 MED16Q9Y2X0 877 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 HRH3Q9Y5N1 445 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 SOWAHDA6NJG2 315 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 GABRR3A8MPY1 467 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 A8MUI8 341 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 FAM227AF5H4B4 570 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 FANCGO15287 622 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 LIASO43766 372 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 NME2P1O60361 137 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 CCNDBP1O95273 360 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 MLYCDO95822 493 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 ESR1P03372 595 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 NME2P22392 152 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 NMBRP28336 390 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 EEF1DP29692 281 aaKnown RBP6.87□□□□□ -1.31
YBX3-209ENST00000540747 STIP1P31948 543 aaKnown RBP6.87□□□□□ -1.31
YBX3-209ENST00000540747 TRHRP34981 398 aaPredicted RBP6.87□□□□□ -1.31
YBX3-209ENST00000540747 PTGER1P34995 402 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 RPA3P35244 121 aaPredicted RBP6.87□□□□□ -1.31
YBX3-209ENST00000540747 HSD17B2P37059 387 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 BCL6P41182 706 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 CETN2P41208 172 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 SKIV2L2P42285 1042 aaKnown RBP6.87□□□□□ -1.31
YBX3-209ENST00000540747 XCR1P46094 333 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 AGTR2P50052 363 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 ST13P50502 369 aaKnown RBP6.87□□□□□ -1.31
YBX3-209ENST00000540747 CLCN7P51798 805 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 PNLIPRP1P54315 467 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 EIF3BP55884 814 aaKnown RBP6.87□□□□□ -1.31
YBX3-209ENST00000540747 KCNJ11Q14654 390 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 USP10Q14694 798 aaKnown RBP6.87□□□□□ -1.31
YBX3-209ENST00000540747 SPA17Q15506 151 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 EXT1Q16394 746 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 MEP1AQ16819 746 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 PCID2Q5JVF3 399 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 SYT10Q6XYQ8 523 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 PPP1R21Q6ZMI0 780 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 GALNTL5Q7Z4T8 443 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 PRUNE1Q86TP1 453 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 PLD3Q8IV08 490 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 SPNS2Q8IVW8 549 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 AFAP1L2Q8N4X5 818 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 TMEM178AQ8NBL3 297 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 PLPP5Q8NEB5 264 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 PPHLN1Q8NEY8 458 aaKnown RBP6.87□□□□□ -1.31
YBX3-209ENST00000540747 OR51Q1Q8NH59 317 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 GIMAP7Q8NHV1 300 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 ELP5Q8TE02 316 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 CHTF18Q8WVB6 975 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 METTL21AQ8WXB1 218 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 RERGQ96A58 199 aaPredicted RBP6.87□□□□□ -1.31
YBX3-209ENST00000540747 TM4SF19Q96DZ7 209 aa6.87□□□□□ -1.31
YBX3-209ENST00000540747 HES6Q96HZ4 224 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms