RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 SDR39U1Q9NRG7 319 aaPredicted RBP11.33□□□□□ -0.6
VTN-202ENST00000539746 MS4A12Q9NXJ0 267 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 SCHIP1Q9P0W5 487 aaPredicted RBP11.33□□□□□ -0.6
VTN-202ENST00000539746 PRDM4Q9UKN5 801 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 POMT2Q9UKY4 750 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 PSME2Q9UL46 239 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 NDUFAF1Q9Y375 327 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 PLEKHM1Q9Y4G2 1056 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 TIMM22Q9Y584 194 aa11.33□□□□□ -0.6
VTN-202ENST00000539746 PCYT1BQ9Y5K3 369 aaPredicted RBP11.33□□□□□ -0.6
VTN-202ENST00000539746 GNG14A0A1W2PPG7 69 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 FAM234BA2RU67 622 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 LRRC14BA6NHZ5 514 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 NOBOXO60393 691 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 UNC5CO95185 931 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 ZBTB11O95625 1053 aaPredicted RBP11.32□□□□□ -0.6
VTN-202ENST00000539746 PDYNP01213 254 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 SNRPB2P08579 225 aaKnown RBP11.32□□□□□ -0.6
VTN-202ENST00000539746 PRR35P0CG20 571 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 UGT2B7P16662 529 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 JAK1P23458 1154 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 TLX1P31314 330 aaPredicted RBP11.32□□□□□ -0.6
VTN-202ENST00000539746 SCTRP47872 440 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 DAB2P98082 770 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 ILKQ13418 452 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 ART3Q13508 389 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 DDX39BQ13838 428 aaKnown RBP11.32□□□□□ -0.6
VTN-202ENST00000539746 FASTKQ14296 549 aaKnown RBP11.32□□□□□ -0.6
VTN-202ENST00000539746 GALNTL6Q49A17 601 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 SLC9B1Q4ZJI4 515 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 KHDRBS2Q5VWX1 349 aaKnown RBP11.32□□□□□ -0.6
VTN-202ENST00000539746 C6orf89Q6UWU4 347 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 LINC01555Q8NAE3 123 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 OR8K5Q8NH50 307 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 SAP25Q8TEE9 199 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 MCUR1Q96AQ8 359 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 THOC1Q96FV9 657 aaKnown RBP11.32□□□□□ -0.6
VTN-202ENST00000539746 IL17FQ96PD4 163 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 CDK15Q96Q40 435 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 CDC6Q99741 560 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 ACAT2Q9BWD1 397 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 DPY30Q9C005 99 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 NMUR2Q9GZQ4 415 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 MYLK2Q9H1R3 596 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 WDR55Q9H6Y2 383 aaPredicted RBP11.32□□□□□ -0.6
VTN-202ENST00000539746 ZNF395Q9H8N7 513 aaPredicted RBP11.32□□□□□ -0.6
VTN-202ENST00000539746 DMRT3Q9NQL9 472 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 AIG1Q9NVV5 245 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 LYARQ9NX58 379 aaKnown RBP11.32□□□□□ -0.6
VTN-202ENST00000539746 MCM8Q9UJA3 840 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 PLAGL1Q9UM63 463 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 BTRCQ9Y297 605 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 ST14Q9Y5Y6 855 aa11.32□□□□□ -0.6
VTN-202ENST00000539746 OR2A25A4D2G3 310 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 H7BY64 318 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 PRICKLE3O43900 615 aaPredicted RBP11.31□□□□□ -0.6
VTN-202ENST00000539746 DNAJA2O60884 412 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 BMP10O95393 424 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 MSL3P1P0C860 447 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 EPORP19235 508 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 POLR2CP19387 275 aaPredicted RBP11.31□□□□□ -0.6
VTN-202ENST00000539746 PRDX3P30048 256 aaKnown RBP11.31□□□□□ -0.6
VTN-202ENST00000539746 ARRB2P32121 409 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 C21orf58P58505 322 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 RPL38P63173 70 aaKnown RBP11.31□□□□□ -0.6
VTN-202ENST00000539746 CSNK1G2P78368 415 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 FOXM1Q08050 763 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 ZNF763Q0D2J5 394 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 BNIP1Q12981 228 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 TRA2AQ13595 282 aaKnown RBP eCLIP11.31□□□□□ -0.6
VTN-202ENST00000539746 C18orf21Q32NC0 220 aaPredicted RBP11.31□□□□□ -0.6
VTN-202ENST00000539746 SGO1Q5FBB7 561 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 FBXO48Q5FWF7 155 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 ANXA8L1Q5VT79 327 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 GARNL3Q5VVW2 1013 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 CES4AQ5XG92 561 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 ZNF425Q6IV72 752 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 FIGLAQ6QHK4 219 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 CYP20A1Q6UW02 462 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 ASPGQ86U10 573 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 FITM2Q8N6M3 262 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 BAHD1Q8TBE0 780 aaPredicted RBP11.31□□□□□ -0.6
VTN-202ENST00000539746 GAL3ST3Q96A11 431 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 PRAP1Q96NZ9 151 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 KCNA7Q96RP8 456 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 EBF4Q9BQW3 602 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 RTKNQ9BST9 563 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 TWSG1Q9GZX9 223 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 TCEAL2Q9H3H9 227 aaPredicted RBP11.31□□□□□ -0.6
VTN-202ENST00000539746 XKR8Q9H6D3 395 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 GIMAP4Q9NUV9 329 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 PHF11Q9UIL8 331 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 ASB1Q9Y576 335 aa11.31□□□□□ -0.6
VTN-202ENST00000539746 ATP6AP2A0A1C7CYW4 349 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 A0A1W2PPV9 198 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 TMEM233B4DJY2 109 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 CAPN5O15484 640 aaPredicted RBP11.3□□□□□ -0.6
VTN-202ENST00000539746 GYG2O15488 501 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 ATP6AP2O75787 350 aa11.3□□□□□ -0.6
VTN-202ENST00000539746 ZNF806P0C7X5 589 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms