RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 AP2B1P63010 937 aa11.84□□□□□ -0.51
VAMP1-206ENST00000538970 CCZ1BP86790 482 aa11.84□□□□□ -0.51
VAMP1-206ENST00000538970 CCZ1P86791 482 aaPredicted RBP11.84□□□□□ -0.51
VAMP1-206ENST00000538970 PRSS41Q7RTY9 318 aa11.84□□□□□ -0.51
VAMP1-206ENST00000538970 FJX1Q86VR8 437 aa11.84□□□□□ -0.51
VAMP1-206ENST00000538970 SHISA5Q8N114 240 aa11.84□□□□□ -0.51
VAMP1-206ENST00000538970 RASGEF1CQ8N431 466 aa11.84□□□□□ -0.51
VAMP1-206ENST00000538970 MAGOHBQ96A72 148 aaKnown RBP11.84□□□□□ -0.51
VAMP1-206ENST00000538970 SIGLEC10Q96LC7 697 aa11.84□□□□□ -0.51
VAMP1-206ENST00000538970 FAM167BQ9BTA0 163 aa11.84□□□□□ -0.51
VAMP1-206ENST00000538970 AARSD1Q9BTE6 412 aaKnown RBP11.84□□□□□ -0.51
VAMP1-206ENST00000538970 VN1R1Q9GZP7 353 aa11.84□□□□□ -0.51
VAMP1-206ENST00000538970 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.84□□□□□ -0.51
VAMP1-206ENST00000538970 TMEM184CQ9NVA4 438 aa11.84□□□□□ -0.51
VAMP1-206ENST00000538970 FBXO5Q9UKT4 447 aa11.84□□□□□ -0.51
VAMP1-206ENST00000538970 F8P00451 2351 aa11.83□□□□□ -0.52
VAMP1-206ENST00000538970 CPAMD8Q8IZJ3 1885 aa11.83□□□□□ -0.52
VAMP1-206ENST00000538970 KCNE1BA0A087WTH5 132 aa11.83□□□□□ -0.52
VAMP1-206ENST00000538970 OR5H15A6NDH6 313 aa11.83□□□□□ -0.52
VAMP1-206ENST00000538970 HAUS5O94927 633 aa11.83□□□□□ -0.52
VAMP1-206ENST00000538970 ICAM2P13598 275 aa11.83□□□□□ -0.52
VAMP1-206ENST00000538970 COILP38432 576 aaPredicted RBP11.83□□□□□ -0.52
VAMP1-206ENST00000538970 RPS15AP62244 130 aaKnown RBP11.83□□□□□ -0.52
VAMP1-206ENST00000538970 CYP1B1Q16678 543 aa11.83□□□□□ -0.52
VAMP1-206ENST00000538970 LRRC8EQ6NSJ5 796 aa11.83□□□□□ -0.52
VAMP1-206ENST00000538970 TMEM214Q6NUQ4 689 aaKnown RBP11.83□□□□□ -0.52
VAMP1-206ENST00000538970 CCDC137Q6PK04 289 aaKnown RBP11.83□□□□□ -0.52
VAMP1-206ENST00000538970 LANCL3Q6ZV70 420 aa11.83□□□□□ -0.52
VAMP1-206ENST00000538970 LRRC8AQ8IWT6 810 aa11.83□□□□□ -0.52
VAMP1-206ENST00000538970 SLC34A3Q8N130 599 aa11.83□□□□□ -0.52
VAMP1-206ENST00000538970 NAT8LQ8N9F0 302 aa11.83□□□□□ -0.52
VAMP1-206ENST00000538970 CALML6Q8TD86 181 aa11.83□□□□□ -0.52
VAMP1-206ENST00000538970 METTL21AQ8WXB1 218 aa11.83□□□□□ -0.52
VAMP1-206ENST00000538970 RELTQ969Z4 430 aa11.83□□□□□ -0.52
VAMP1-206ENST00000538970 MS4A14Q96JA4 679 aa11.83□□□□□ -0.52
VAMP1-206ENST00000538970 ABI3Q9P2A4 366 aa11.83□□□□□ -0.52
VAMP1-206ENST00000538970 ADAMTS6Q9UKP5 1117 aa11.83□□□□□ -0.52
VAMP1-206ENST00000538970 SH2B3Q9UQQ2 575 aa11.83□□□□□ -0.52
VAMP1-206ENST00000538970 ENTPD4Q9Y227 616 aa11.83□□□□□ -0.52
VAMP1-206ENST00000538970 MAD1L1Q9Y6D9 718 aa11.83□□□□□ -0.52
VAMP1-206ENST00000538970 AKAP9Q99996 3911 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 IGHV3-20A0A0C4DH32 117 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 PRAMEF2O60811 474 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 SEC24DO94855 1032 aaPredicted RBP11.82□□□□□ -0.52
VAMP1-206ENST00000538970 RASAL1O95294 804 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 IL1RNP18510 177 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 MST1P26927 711 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 BCL6P41182 706 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 XCR1P46094 333 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 CSNK1G2P78368 415 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 TIAL1Q01085 375 aaKnown RBP eCLIP11.82□□□□□ -0.52
VAMP1-206ENST00000538970 ZNF33BQ06732 778 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 SP140Q13342 867 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 PTK6Q13882 451 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 MINDY4Q4G0A6 757 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 HSP90AA5PQ58FG0 334 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 MFSD4BQ5TF39 518 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 ABHD17BQ5VST6 288 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 PLAG1Q6DJT9 500 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 GFRALQ6UXV0 394 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 MBOAT1Q6ZNC8 495 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 CPEB2Q7Z5Q1 589 aaKnown RBP11.82□□□□□ -0.52
VAMP1-206ENST00000538970 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.82□□□□□ -0.52
VAMP1-206ENST00000538970 OR51Q1Q8NH59 317 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 ZCCHC10Q8TBK6 192 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 MCOLN3Q8TDD5 553 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 MARVELD3Q96A59 401 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 TM4SF19Q96DZ7 209 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 THAP11Q96EK4 314 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 CCDC138Q96M89 665 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 CYTH2Q99418 400 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 NDNQ99608 321 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 MACROD1Q9BQ69 325 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 UNKQ9C0B0 810 aaKnown RBP11.82□□□□□ -0.52
VAMP1-206ENST00000538970 PCBD2Q9H0N5 130 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 IARS2Q9NSE4 1012 aaKnown RBP11.82□□□□□ -0.52
VAMP1-206ENST00000538970 HCN3Q9P1Z3 774 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 C19orf25Q9UFG5 118 aaPredicted RBP11.82□□□□□ -0.52
VAMP1-206ENST00000538970 TEKT2Q9UIF3 430 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 TRMT6Q9UJA5 497 aaKnown RBP11.82□□□□□ -0.52
VAMP1-206ENST00000538970 PDE10AQ9Y233 779 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 PPP2R2CQ9Y2T4 447 aa11.82□□□□□ -0.52
VAMP1-206ENST00000538970 ARHGAP10A1A4S6 786 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 SGK494L7N484 410 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 PGRMC1O00264 195 aaKnown RBP11.81□□□□□ -0.52
VAMP1-206ENST00000538970 UNC5CO95185 931 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 CRYABP02511 175 aaKnown RBP11.81□□□□□ -0.52
VAMP1-206ENST00000538970 C8GP07360 202 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 PGAM1P18669 254 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 CRYMQ14894 314 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 BTBD16Q32M84 506 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 KRTAP21-3Q3LHN1 58 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 UGT3A1Q6NUS8 523 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 AGTRAPQ6RW13 159 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 ANKRD37Q7Z713 158 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 PCGF5Q86SE9 256 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 ASPGQ86U10 573 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 C17orf64Q86WR6 236 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 PDSS2Q86YH6 399 aa11.81□□□□□ -0.52
VAMP1-206ENST00000538970 KCT2Q8NC54 265 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms