RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 AADATQ8N5Z0 425 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 WDR20Q8TBZ3 569 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 CLP1Q92989 425 aaKnown RBP12.43□□□□□ -0.42
TRIM25-202ENST00000537230 TESCQ96BS2 214 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 RDH12Q96NR8 316 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 SH3GL1Q99961 368 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 RBM4BQ9BQ04 359 aaKnown RBP12.43□□□□□ -0.42
TRIM25-202ENST00000537230 RBM4Q9BWF3 364 aaKnown RBP12.43□□□□□ -0.42
TRIM25-202ENST00000537230 PABPN1LA6NDY0 278 aaKnown RBP12.43□□□□□ -0.42
TRIM25-202ENST00000537230 FAM220BPB1ANY3 271 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 MITFO75030 526 aaPredicted RBP12.43□□□□□ -0.42
TRIM25-202ENST00000537230 FTH1P02794 183 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 RETP07949 1114 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 ITIH1P19827 911 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 DCTP40126 519 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 KIR3DL1P43629 444 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 MAP2K4P45985 399 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 GABARAPL2P60520 117 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 VBP1P61758 197 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 VAC14Q08AM6 782 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 SP140Q13342 867 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 DGCR6Q14129 220 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 AGTRAPQ6RW13 159 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 TECPR1Q7Z6L1 1165 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 GALNT5Q7Z7M9 940 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 SYT12Q8IV01 421 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 TMEM132CQ8N3T6 1108 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 BTN2A2Q8WVV5 523 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 FAR1Q8WVX9 515 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 POLE4Q9NR33 117 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 GIN1Q9NXP7 522 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 STOX2Q9P2F5 926 aaPredicted RBP12.43□□□□□ -0.42
TRIM25-202ENST00000537230 IL36AQ9UHA7 158 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 VPS4AQ9UN37 437 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 TMEM98Q9Y2Y6 226 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 NUMA1Q14980 2115 aa12.43□□□□□ -0.42
TRIM25-202ENST00000537230 CXorf51AA0A1B0GTR3 108 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 MAGEB17A8MXT2 336 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 ZNF99A8MXY4 864 aaPredicted RBP12.42□□□□□ -0.42
TRIM25-202ENST00000537230 CNOT3O75175 753 aaKnown RBP12.42□□□□□ -0.42
TRIM25-202ENST00000537230 GSTM1P09488 218 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 LAMP1P11279 417 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 PTPN2P17706 415 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 HTRA4P83105 476 aaPredicted RBP12.42□□□□□ -0.42
TRIM25-202ENST00000537230 IL5RAQ01344 420 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 RAPSNQ13702 412 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 MAPK11Q15759 364 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 TMEM236Q5W0B7 351 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 TMEM53Q6P2H8 277 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 PARS2Q7L3T8 475 aaKnown RBP12.42□□□□□ -0.42
TRIM25-202ENST00000537230 GALNT13Q8IUC8 556 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 SFTPA1Q8IWL2 248 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 HPS1Q92902 700 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 GLMNQ92990 594 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 PANX1Q96RD7 426 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 RHNO1Q9BSD3 238 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 C3orf18Q9UK00 162 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 ABCG2Q9UNQ0 655 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 SH2B3Q9UQQ2 575 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 NPC1O15118 1278 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 PSIP1O75475 530 aaKnown RBP12.42□□□□□ -0.42
TRIM25-202ENST00000537230 ARHGEF15O94989 841 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 NADKO95544 446 aaPredicted RBP12.42□□□□□ -0.42
TRIM25-202ENST00000537230 ZNF682O95780 498 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 CYP2A6P11509 494 aaPredicted RBP12.42□□□□□ -0.42
TRIM25-202ENST00000537230 CYP4B1P13584 511 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 CEBPBP17676 345 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 IMPA1P29218 277 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 FMO3P31513 532 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 DCDC1P59894 354 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 CDK5R2Q13319 367 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 INAQ16352 499 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 ZNF691Q5VV52 312 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 ZCCHC8Q6NZY4 707 aaKnown RBP12.42□□□□□ -0.42
TRIM25-202ENST00000537230 LIPIQ6XZB0 460 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 VTCN1Q7Z7D3 282 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 KIAA0907Q7Z7F0 614 aaPredicted RBP12.42□□□□□ -0.42
TRIM25-202ENST00000537230 DSG4Q86SJ6 1040 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 TRAM1L1Q8N609 369 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 POF1BQ8WVV4 589 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 GLYATL1Q969I3 302 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 SAGE1Q9NXZ1 904 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 ERVK-18Q9QC07 812 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 VPS29Q9UBQ0 182 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 TMEFF2Q9UIK5 374 aaPredicted RBP12.42□□□□□ -0.42
TRIM25-202ENST00000537230 FAM32AQ9Y421 112 aaKnown RBP12.42□□□□□ -0.42
TRIM25-202ENST00000537230 PMF1-BGLAPU3KQ54 211 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 TRIOO75962 3097 aa12.42□□□□□ -0.42
TRIM25-202ENST00000537230 PRUNE2Q8WUY3 3088 aa12.41□□□□□ -0.42
TRIM25-202ENST00000537230 M0R3G1 203 aa12.41□□□□□ -0.42
TRIM25-202ENST00000537230 SLC16A5O15375 505 aa12.41□□□□□ -0.42
TRIM25-202ENST00000537230 SPINT1O43278 529 aa12.41□□□□□ -0.42
TRIM25-202ENST00000537230 KDM1AO60341 852 aa12.41□□□□□ -0.42
TRIM25-202ENST00000537230 CPSF4O95639 269 aaKnown RBP12.41□□□□□ -0.42
TRIM25-202ENST00000537230 BMP4P12644 408 aa12.41□□□□□ -0.42
TRIM25-202ENST00000537230 HLA-EP13747 358 aa12.41□□□□□ -0.42
TRIM25-202ENST00000537230 ENGP17813 658 aa12.41□□□□□ -0.42
TRIM25-202ENST00000537230 MMP12P39900 470 aa12.41□□□□□ -0.42
TRIM25-202ENST00000537230 IL1RL1Q01638 556 aa12.41□□□□□ -0.42
TRIM25-202ENST00000537230 TMEM115Q12893 351 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms