RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 SOX8P57073 446 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 SNRPNP63162 240 aaKnown RBP9.91□□□□□ -0.82
CAPN1-225ENST00000533704 CSNK1G2P78368 415 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 ZNF460Q14592 562 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 AGAP7PQ5VUJ5 663 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 LCTLQ6UWM7 567 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 LINC00696Q6ZRV3 163 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 PRSS41Q7RTY9 318 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 VN1R4Q7Z5H5 301 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 ASPGQ86U10 573 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 IQCKQ8N0W5 287 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 AMER3Q8N944 861 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 GALNT11Q8NCW6 608 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 BBOF1Q8ND07 529 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 PYROXD1Q8WU10 500 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 C19orf60Q96EN9 201 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 TSNARE1Q96NA8 513 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 AGAP4Q96P64 663 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 HAUS8Q9BT25 410 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 SLC29A3Q9BZD2 475 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 LHPPQ9H008 270 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 SAYSD1Q9NPB0 183 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 MKKSQ9NPJ1 570 aaPredicted RBP9.91□□□□□ -0.82
CAPN1-225ENST00000533704 C14orf105Q9NVL8 296 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 IKZF3Q9UKT9 509 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 DIDO1Q9BTC0 2240 aaKnown RBP9.9□□□□□ -0.82
CAPN1-225ENST00000533704 IGLV3-12A0A075B6K2 115 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 FAM187AA6NFU0 413 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 SGK494L7N484 410 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 CDC7O00311 574 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 TP73O15350 636 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 RAD51CO43502 376 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 OR1F1O43749 312 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 LCMT2O60294 686 aaKnown RBP9.9□□□□□ -0.82
CAPN1-225ENST00000533704 JRKO75564 520 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 COX6A1P12074 109 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 NPPBP16860 134 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 SLC26A3P40879 764 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 CCR8P51685 355 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 SLC12A2P55011 1212 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 AP1S2P56377 157 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 TAS2R39P59534 338 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 RELAQ04206 551 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 Q0VFX4 171 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 MRPL49Q13405 166 aaKnown RBP9.9□□□□□ -0.82
CAPN1-225ENST00000533704 FAM53BQ14153 422 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 MINDY4Q4G0A6 757 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 DUPD1Q68J44 220 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 SYT10Q6XYQ8 523 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 NDUFAF7Q7L592 441 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 MAATS1Q7Z4T9 603 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 SLC26A11Q86WA9 606 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 ZC3HC1Q86WB0 502 aaKnown RBP9.9□□□□□ -0.82
CAPN1-225ENST00000533704 CCDC25Q86WR0 208 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 ZC3H7AQ8IWR0 971 aaKnown RBP9.9□□□□□ -0.82
CAPN1-225ENST00000533704 KBTBD2Q8IY47 623 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 FAM26EQ8N5C1 309 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 KCT2Q8NC54 265 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 CAMKVQ8NCB2 501 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 SPATA4Q8NEY3 305 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 SLC13A3Q8WWT9 602 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 ATL1Q8WXF7 558 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 FBXL8Q96CD0 374 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 THAP11Q96EK4 314 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 EGFL8Q99944 293 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 WDR77Q9BQA1 342 aaPredicted RBP9.9□□□□□ -0.82
CAPN1-225ENST00000533704 ERP44Q9BS26 406 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 SGPP1Q9BX95 441 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 RBCK1Q9BYM8 510 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 UNKQ9C0B0 810 aaKnown RBP9.9□□□□□ -0.82
CAPN1-225ENST00000533704 EPS8L2Q9H6S3 715 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 ANKHQ9HCJ1 492 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 ASF1BQ9NVP2 202 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 MKL2Q9ULH7 1088 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 DYRK1BQ9Y463 629 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 CSAG2Q9Y5P2 127 aa9.9□□□□□ -0.82
CAPN1-225ENST00000533704 NAV2Q8IVL1 2488 aa9.9□□□□□ -0.83
CAPN1-225ENST00000533704 USP9YO00507 2555 aaPredicted RBP9.89□□□□□ -0.83
CAPN1-225ENST00000533704 ZNF860A6NHJ4 632 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 TCP11X1B4DZS4 312 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 E7ESA3 106 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 NDUFS4O43181 175 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 RDH16O75452 317 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 KLHL18O94889 574 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 AGFG2O95081 481 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 CELA2AP08217 269 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 ENO2P09104 434 aaPredicted RBP9.89□□□□□ -0.83
CAPN1-225ENST00000533704 SLC35G6P0C7Q6 338 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 ZNF37AP17032 561 aaPredicted RBP9.89□□□□□ -0.83
CAPN1-225ENST00000533704 VARSP26640 1264 aaKnown RBP9.89□□□□□ -0.83
CAPN1-225ENST00000533704 SSTR1P30872 391 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 XCR1P46094 333 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 SRSF1Q07955 248 aaKnown RBP eCLIP9.89□□□□□ -0.83
CAPN1-225ENST00000533704 FRG1Q14331 258 aaKnown RBP9.89□□□□□ -0.83
CAPN1-225ENST00000533704 CSHL1Q14406 222 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 NR6A1Q15406 480 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 ZXDCQ2QGD7 858 aaPredicted RBP9.89□□□□□ -0.83
CAPN1-225ENST00000533704 CATSPEREQ5SY80 951 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 FHL5Q5TD97 284 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 ATG9BQ674R7 924 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms