RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 EIF3FO00303 357 aaPredicted RBP8.32□□□□□ -1.08
COPB1-210ENST00000533533 ZSCAN9O15535 394 aaPredicted RBP8.32□□□□□ -1.08
COPB1-210ENST00000533533 PHGDHO43175 533 aaKnown RBP8.32□□□□□ -1.08
COPB1-210ENST00000533533 LRRTM2O43300 516 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 GUCA1CO95843 209 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 C8GP07360 202 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 CTSBP07858 339 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 UMODP07911 640 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 STMN1P16949 149 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 MAGP20916 626 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 ITGA3P26006 1051 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 DEKP35659 375 aaKnown RBP8.32□□□□□ -1.08
COPB1-210ENST00000533533 PNLIPRP1P54315 467 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 FOXL2P58012 376 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 POU4F1Q01851 419 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 ILF2Q12905 390 aaKnown RBP8.32□□□□□ -1.08
COPB1-210ENST00000533533 AIMP2Q13155 320 aaKnown RBP8.32□□□□□ -1.08
COPB1-210ENST00000533533 NAB1Q13506 487 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 BMPR2Q13873 1038 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 SLC9A5Q14940 896 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 CYP2A13Q16696 494 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 SLC5A12Q1EHB4 618 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 UBAP2Q5T6F2 1119 aaKnown RBP8.32□□□□□ -1.08
COPB1-210ENST00000533533 MRPL14Q6P1L8 145 aaKnown RBP8.32□□□□□ -1.08
COPB1-210ENST00000533533 TLDC1Q6P9B6 456 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 FRA10AC1Q70Z53 315 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 ADCK2Q7Z695 626 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 CEP97Q8IW35 865 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 TMEM151BQ8IW70 566 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 NKAPQ8N5F7 415 aaKnown RBP8.32□□□□□ -1.08
COPB1-210ENST00000533533 ZNF655Q8N720 491 aaPredicted RBP8.32□□□□□ -1.08
COPB1-210ENST00000533533 DENND1AQ8TEH3 1009 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 SMPDL3AQ92484 453 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 NACC2Q96BF6 587 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 CYTH2Q99418 400 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 WDR77Q9BQA1 342 aaPredicted RBP8.32□□□□□ -1.08
COPB1-210ENST00000533533 MENTQ9BUN1 341 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 TXLNGQ9NUQ3 528 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 ARL15Q9NXU5 204 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 UTP6Q9NYH9 597 aaKnown RBP8.32□□□□□ -1.08
COPB1-210ENST00000533533 TAC3Q9UHF0 121 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 SRPK3Q9UPE1 567 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 PDE10AQ9Y233 779 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 CSAG2Q9Y5P2 127 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 GTF3C1Q12789 2109 aa8.32□□□□□ -1.08
COPB1-210ENST00000533533 ZFHX3Q15911 3703 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 A0A087WUV0 522 aaPredicted RBP8.31□□□□□ -1.08
COPB1-210ENST00000533533 NPEPPSL1A6NEC2 478 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 GFYI3L273 518 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 MYO1CO00159 1063 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 SLC16A5O15375 505 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 HNRNPRO43390 633 aaKnown RBP8.31□□□□□ -1.08
COPB1-210ENST00000533533 SLC16A8O95907 504 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 INHBAP08476 426 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 ZNF37AP17032 561 aaPredicted RBP8.31□□□□□ -1.08
COPB1-210ENST00000533533 ELAVL4P26378 380 aaKnown RBP8.31□□□□□ -1.08
COPB1-210ENST00000533533 ECHS1P30084 290 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 CMPK1P30085 196 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 HSD17B2P37059 387 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 GRIA3P42263 894 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 PER3P56645 1201 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 LSM11P83369 360 aaKnown RBP eCLIP8.31□□□□□ -1.08
COPB1-210ENST00000533533 SP140Q13342 867 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 ARHGAP19Q14CB8 494 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 MROH9Q5TGP6 573 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 FIGLAQ6QHK4 219 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 TMEM207Q6UWW9 146 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 MBOAT1Q6ZNC8 495 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 CYS1Q717R9 158 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 SPATA6LQ8N4H0 392 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 DNAJC22Q8N4W6 341 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 FLVCR1-AS1Q8TAF5 88 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 PPP4R1Q8TF05 950 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 ZNF480Q8WV37 535 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 EXT2Q93063 718 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 CCDC138Q96M89 665 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 GPR22Q99680 433 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 EGFL8Q99944 293 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 NDC1Q9BTX1 674 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 ATG10Q9H0Y0 220 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 PARVBQ9HBI1 364 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 SLC6A20Q9NP91 592 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 MRPS30Q9NP92 439 aaKnown RBP8.31□□□□□ -1.08
COPB1-210ENST00000533533 SLC22A11Q9NSA0 550 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 CTNNAL1Q9UBT7 734 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.31□□□□□ -1.08
COPB1-210ENST00000533533 FBXL4Q9UKA2 621 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 NOVA2Q9UNW9 492 aaKnown RBP8.31□□□□□ -1.08
COPB1-210ENST00000533533 ENTPD4Q9Y227 616 aa8.31□□□□□ -1.08
COPB1-210ENST00000533533 V9GYY5 206 aaPredicted RBP8.31□□□□□ -1.08
COPB1-210ENST00000533533 SCN2AQ99250 2005 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 EXOC1LA0A1B0GW35 172 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 NCF1BA6NI72 391 aaPredicted RBP8.3□□□□□ -1.08
COPB1-210ENST00000533533 NCF1CA8MVU1 366 aaPredicted RBP8.3□□□□□ -1.08
COPB1-210ENST00000533533 CDC7O00311 574 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 E2F3O00716 465 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 CCNDBP1O95273 360 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 SLU7O95391 586 aaKnown RBP8.3□□□□□ -1.08
COPB1-210ENST00000533533 TSPAN12O95859 305 aa8.3□□□□□ -1.08
COPB1-210ENST00000533533 C1QAP02745 245 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms