RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 DPH1Q9BZG8 443 aa13.82□□□□□ -0.2
CPSF1-206ENST00000531480 FAM117AQ9C073 453 aa13.82□□□□□ -0.2
CPSF1-206ENST00000531480 GEMIN8Q9NWZ8 242 aaKnown RBP13.82□□□□□ -0.2
CPSF1-206ENST00000531480 PCTPQ9UKL6 214 aa13.82□□□□□ -0.2
CPSF1-206ENST00000531480 SRPK3Q9UPE1 567 aa13.82□□□□□ -0.2
CPSF1-206ENST00000531480 A0A087WV48 116 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 LRRC14BA6NHZ5 514 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 AGPSO00116 658 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 TXNDC9O14530 226 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 TERTO14746 1132 aaKnown RBP13.81□□□□□ -0.2
CPSF1-206ENST00000531480 ZNF749O43361 778 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 UGDHO60701 494 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 EPB42P16452 691 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 CD22P20273 847 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 TAC1P20366 129 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 GSTM2P28161 218 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 GRK3P35626 688 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 PRKAA2P54646 552 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 ARSFP54793 590 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 VSX2P58304 361 aaPredicted RBP13.81□□□□□ -0.2
CPSF1-206ENST00000531480 HERVK_113P63132 956 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 CLN3Q13286 438 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 GRM7Q14831 915 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 WASHC2DQ5SRD0 308 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 GARNL3Q5VVW2 1013 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 ZYG11AQ6WRX3 759 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 ADCK2Q7Z695 626 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 TMPRSS11BQ86T26 416 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 EXOC3L1Q86VI1 746 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 PLD3Q8IV08 490 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 SLC22A9Q8IVM8 553 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 DSELQ8IZU8 1212 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 NLGN4XQ8N0W4 816 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 ANKRD53Q8N9V6 530 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 L3MBTL4Q8NA19 623 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 NLGN4YQ8NFZ3 816 aaPredicted RBP13.81□□□□□ -0.2
CPSF1-206ENST00000531480 PROKR1Q8TCW9 393 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 ZNF483Q8TF39 744 aaPredicted RBP13.81□□□□□ -0.2
CPSF1-206ENST00000531480 N4BP2L2Q92802 583 aaPredicted RBP13.81□□□□□ -0.2
CPSF1-206ENST00000531480 PHF21BQ96EK2 531 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 L3HYPDHQ96EM0 354 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 GBP5Q96PP8 586 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 SH3GL2Q99962 352 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 DPH2Q9BQC3 489 aaPredicted RBP13.81□□□□□ -0.2
CPSF1-206ENST00000531480 AIF1LQ9BQI0 150 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 EFCAB11Q9BUY7 163 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 ERVK-6Q9BXR3 956 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 ACTR5Q9H9F9 607 aaPredicted RBP13.81□□□□□ -0.2
CPSF1-206ENST00000531480 ZBTB26Q9HCK0 441 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 TSC22D4Q9Y3Q8 395 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 PKD1L2Q7Z442 2459 aa13.81□□□□□ -0.2
CPSF1-206ENST00000531480 FEZF1A0PJY2 475 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 CLGNO14967 610 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 P2RX6O15547 441 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 RAD1O60671 282 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 KATNA1O75449 491 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 NTRK1P04629 796 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 CREB1P16220 341 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 IMPDH1P20839 514 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 CXCR2P25025 360 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 VARSP26640 1264 aaKnown RBP13.8□□□□□ -0.2
CPSF1-206ENST00000531480 EEF1DP29692 281 aaKnown RBP13.8□□□□□ -0.2
CPSF1-206ENST00000531480 STAT5AP42229 794 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 ETV4P43268 484 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 MEF2AQ02078 507 aaPredicted RBP13.8□□□□□ -0.2
CPSF1-206ENST00000531480 ABHD18Q0P651 414 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 PWP1Q13610 501 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 GTF2H2Q13888 395 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 DOC2AQ14183 400 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 FAM214AQ32MH5 1076 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 ZNF678Q5SXM1 525 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 GTF2H2CQ6P1K8 395 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 C19orf48Q6RUI8 117 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 C6orf15Q6UXA7 325 aaPredicted RBP13.8□□□□□ -0.2
CPSF1-206ENST00000531480 GOLGA7Q7Z5G4 137 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 LAS2Q8IYD9 372 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 ESX1Q8N693 406 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 TEX9Q8N6V9 391 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 ZNF655Q8N720 491 aaPredicted RBP13.8□□□□□ -0.2
CPSF1-206ENST00000531480 SNX31Q8N9S9 440 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 CCDC126Q96EE4 140 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 C10orf90Q96M02 699 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 SMC6Q96SB8 1091 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 NTMT1Q9BV86 223 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 ZFP69BQ9UJL9 534 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 ZNF490Q9ULM2 529 aaPredicted RBP13.8□□□□□ -0.2
CPSF1-206ENST00000531480 FAM208BQ5VWN6 2430 aa13.8□□□□□ -0.2
CPSF1-206ENST00000531480 TEX51A0A1B0GUA7 166 aa13.79□□□□□ -0.2
CPSF1-206ENST00000531480 HYKKA2RU49 373 aa13.79□□□□□ -0.2
CPSF1-206ENST00000531480 MEN1O00255 615 aa13.79□□□□□ -0.2
CPSF1-206ENST00000531480 OR7A17O14581 309 aa13.79□□□□□ -0.2
CPSF1-206ENST00000531480 SASH3O75995 380 aa13.79□□□□□ -0.2
CPSF1-206ENST00000531480 MED26O95402 600 aa13.79□□□□□ -0.2
CPSF1-206ENST00000531480 ITGAXP20702 1163 aa13.79□□□□□ -0.2
CPSF1-206ENST00000531480 DNAJB13P59910 316 aa13.79□□□□□ -0.2
CPSF1-206ENST00000531480 NAA20P61599 178 aa13.79□□□□□ -0.2
CPSF1-206ENST00000531480 HYAL2Q12891 473 aa13.79□□□□□ -0.2
CPSF1-206ENST00000531480 CHIT1Q13231 466 aa13.79□□□□□ -0.2
CPSF1-206ENST00000531480 LAPTM5Q13571 262 aa13.79□□□□□ -0.2
CPSF1-206ENST00000531480 FAM53BQ14153 422 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms