RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 SIMC1Q8NDZ2 872 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 MED8Q96G25 268 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 EGLN2Q96KS0 407 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 DACH2Q96NX9 599 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 TBCDQ9BTW9 1192 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 ADNPQ9H2P0 1102 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 CCDC177Q9NQR7 707 aaPredicted RBP11.18□□□□□ -0.62
USP35-207ENST00000530546 POLE4Q9NR33 117 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 VAPAQ9P0L0 249 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 DLGAP4Q9Y2H0 992 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 SNX5Q9Y5X3 404 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 CXorf51AA0A1B0GTR3 108 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 ANTXRLA6NF34 631 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 PRRT4C9JH25 899 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 TOR1BO14657 336 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 PRAMEF4O60810 478 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 CISD3P0C7P0 127 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 HRH2P25021 359 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 BDKRB1P46663 353 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 PWP1Q13610 501 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 FNDC3BQ53EP0 1204 aaKnown RBP11.18□□□□□ -0.62
USP35-207ENST00000530546 PLEKHS1Q5SXH7 462 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 HENMT1Q5T8I9 393 aaKnown RBP11.18□□□□□ -0.62
USP35-207ENST00000530546 PRAMEF9Q5VWM5 478 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 FAM109BQ6ICB4 259 aaPredicted RBP11.18□□□□□ -0.62
USP35-207ENST00000530546 ERAP2Q6P179 960 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 TRIM46Q7Z4K8 759 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 ANKRD46Q86W74 232 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 C8orf59Q8N0T1 100 aaPredicted RBP11.18□□□□□ -0.62
USP35-207ENST00000530546 SVOPQ8N4V2 548 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 TRAM1L1Q8N609 369 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 CDC26Q8NHZ8 85 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 ASZ1Q8WWH4 475 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 BIRC7Q96CA5 298 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 RDH12Q96NR8 316 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 DNAJC11Q9NVH1 559 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 MARK1Q9P0L2 795 aa11.18□□□□□ -0.62
USP35-207ENST00000530546 CHD9Q3L8U1 2897 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 ICMTO60725 284 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 NDUFS2O75306 463 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 B3GALT4O96024 378 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 FTH1P02794 183 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 M6PRP20645 277 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 HOXA9P31269 272 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 LBX1P52954 281 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 CHIT1Q13231 466 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 MAD2L1Q13257 205 aaPredicted RBP11.17□□□□□ -0.62
USP35-207ENST00000530546 TMEM220Q6QAJ8 160 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 LIPIQ6XZB0 460 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 PRSS48Q7RTY5 328 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 LRRC70Q7Z2Q7 622 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 KIAA0907Q7Z7F0 614 aaPredicted RBP11.17□□□□□ -0.62
USP35-207ENST00000530546 SIX5Q8N196 739 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 DPP10Q8N608 796 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 LMNTD1Q8N9Z9 388 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 BTN2A2Q8WVV5 523 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 HTRA1Q92743 480 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 USP7Q93009 1102 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 OTUB2Q96DC9 234 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 RNF145Q96MT1 663 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 OR52E6Q96RD3 313 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 BDH2Q9BUT1 245 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 KLHL42Q9P2K6 505 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 ANAPC2Q9UJX6 822 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 ZNF221Q9UK13 617 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 NAALAD2Q9Y3Q0 740 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 HELZP42694 1942 aaKnown RBP11.17□□□□□ -0.62
USP35-207ENST00000530546 OTOL1A6NHN0 477 aaPredicted RBP11.17□□□□□ -0.62
USP35-207ENST00000530546 ARHGEF33A8MVX0 844 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 CCNKO75909 580 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 PGRP06401 933 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 CA3P07451 260 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 MPC1LP0DKB6 136 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 TACR1P25103 407 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 SHMT2P34897 504 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 ALDH3A2P51648 485 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 P2RX3P56373 397 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 GBX1Q14549 363 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 KIAA0040Q15053 153 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 CACUL1Q86Y37 369 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 OR10A6Q8NH74 314 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 FIG4Q92562 907 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 GLYATL1Q969I3 302 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 TMEM159Q96B96 161 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 APIPQ96GX9 242 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 APOLD1Q96LR9 279 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 NSMCE2Q96MF7 247 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 ZSCAN5AQ9BUG6 496 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 EBPLQ9BY08 206 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 DGCR6LQ9BY27 220 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 SLC29A3Q9BZD2 475 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 SOX17Q9H6I2 414 aaPredicted RBP11.17□□□□□ -0.62
USP35-207ENST00000530546 SNX6Q9UNH7 406 aa11.17□□□□□ -0.62
USP35-207ENST00000530546 H0Y858 1186 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 GFYI3L273 518 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 IFRD1O00458 451 aaPredicted RBP11.16□□□□□ -0.62
USP35-207ENST00000530546 KCNK2O95069 426 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 DLGAP3O95886 979 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 ADH1CP00326 375 aa11.16□□□□□ -0.62
USP35-207ENST00000530546 PDHA2P29803 388 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms