RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 ATMQ13315 3056 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 TRBC2A0A5B9 178 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 CDC14CA4D256 554 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 TRIM49D1C9J1S8 452 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 UBXN8O00124 270 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 MAP2K7O14733 419 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 P2RX6O15547 441 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 OR1F1O43749 312 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 CNOT3O75175 753 aaKnown RBP12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 STK16O75716 305 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 ALBP02768 609 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 COL6A2P12110 1019 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 MTHFD2P13995 350 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 GNAZP19086 355 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 OR1D4P47884 311 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 HSPA7P48741 367 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 IL10RAQ13651 578 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 SLC9A5Q14940 896 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 DEFB109BQ30KR1 87 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 SOWAHCQ53LP3 525 aaPredicted RBP12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 FAM69BQ5VUD6 431 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 KLC3Q6P597 504 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 BORAQ6PGQ7 559 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 IGSF10Q6WRI0 2623 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 TIFABQ6ZNK6 161 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 COX15Q7KZN9 410 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 PLD6Q8N2A8 252 aaKnown RBP12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 DTWD1Q8N5C7 304 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 ZNF740Q8NDX6 193 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 ADAMTS17Q8TE56 1095 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 EXT2Q93063 718 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 ESAMQ96AP7 390 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 FKBP10Q96AY3 582 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 MVB12AQ96EY5 273 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 CCDC77Q9BR77 488 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 SLC26A1Q9H2B4 701 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 ZNF304Q9HCX3 659 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 GPRC5BQ9NZH0 403 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 NUDT4Q9NZJ9 180 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 CDC14AQ9UNH5 594 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 POLHQ9Y253 713 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 MAU2Q9Y6X3 613 aa12.07□□□□□ -0.48
CCDC90B-216ENST00000529856 SYCE1LA8MT33 242 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 SUPT3HB4E1H0 165 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 SUPT3HO75486 399 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 STATHP02808 62 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 C1GALT1C1LP0DN25 315 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 SCTRP47872 440 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 GLRBP48167 497 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 REEP5Q00765 189 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 CDC16Q13042 620 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 FAM53BQ14153 422 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 NKG7Q16617 165 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 NDUFA9Q16795 377 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 FBXO48Q5FWF7 155 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 SLCO4C1Q6ZQN7 724 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 TMPRSS11BQ86T26 416 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 ASPGQ86U10 573 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 TBC1D19Q8N5T2 526 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 METTL27Q8N6F8 245 aaPredicted RBP12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 CAMKVQ8NCB2 501 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 OR2Y1Q8NGV0 311 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 SLC13A3Q8WWT9 602 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 THAP4Q8WY91 577 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 COL26A1Q96A83 441 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 MTBPQ96DY7 904 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 MACROD1Q9BQ69 325 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 AIF1LQ9BQI0 150 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 ARHGAP9Q9BRR9 750 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 CD244Q9BZW8 370 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 SPNS1Q9H2V7 528 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 WDR54Q9H977 334 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 DNAJC11Q9NVH1 559 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 ZNF358Q9NW07 568 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 PTRH2Q9Y3E5 179 aaKnown RBP12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 KCNMB2Q9Y691 235 aa12.06□□□□□ -0.48
CCDC90B-216ENST00000529856 VSTM2BA6NLU5 285 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 TK2O00142 265 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 FOXS1O43638 330 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 KLK8O60259 260 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 CCNT2O60583 730 aaKnown RBP12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 H2AFYO75367 372 aaKnown RBP12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 RFPL1O75677 317 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 VARSP26640 1264 aaKnown RBP12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 AHRP35869 848 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 FOLR3P41439 243 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 CCR10P46092 362 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 AGTR2P50052 363 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 VSNL1P62760 191 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 SNRPNP63162 240 aaKnown RBP12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 PWP1Q13610 501 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 SSPNQ14714 243 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 TECRLQ5HYJ1 363 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 ATG9BQ674R7 924 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 TMEM214Q6NUQ4 689 aaKnown RBP12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 LRRC70Q7Z2Q7 622 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 CNPY4Q8N129 248 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 EXD3Q8N9H8 876 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 KCT2Q8NC54 265 aa12.05□□□□□ -0.48
CCDC90B-216ENST00000529856 UBTD2Q8WUN7 234 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms