RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 SYPP08247 313 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 SMU1Q2TAY7 513 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 PLA2G2CQ5R387 149 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 THEMIS2Q5TEJ8 643 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 OGFOD3Q6PK18 319 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 CYP20A1Q6UW02 462 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 KANSL1Q7Z3B3 1105 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 AMIGO1Q86WK6 493 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 C17orf82Q86X59 251 aaPredicted RBP18.07■□□□□ 0.48
SMPD1-203ENST00000527275 ZFPM2Q8WW38 1151 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 HOPXQ9BPY8 73 aaPredicted RBP18.07■□□□□ 0.48
SMPD1-203ENST00000527275 GTPBP2Q9BX10 602 aaKnown RBP18.07■□□□□ 0.48
SMPD1-203ENST00000527275 RAB11FIP5Q9BXF6 653 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 TMEM181Q9P2C4 612 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 BCAP29Q9UHQ4 241 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 RALGAPA1Q6GYQ0 2036 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 KCNE1BA0A087WTH5 132 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 FAM234BA2RU67 622 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 KHNYNO15037 678 aaKnown RBP18.06■□□□□ 0.48
SMPD1-203ENST00000527275 PPM1DO15297 605 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 KDM1AO60341 852 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 BAG2O95816 211 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 PDYNP01213 254 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 ENGP17813 658 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 TCN1P20061 433 aaPredicted RBP18.06■□□□□ 0.48
SMPD1-203ENST00000527275 IL12AP29459 219 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 FASLGP48023 281 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 RPL38P63173 70 aaKnown RBP18.06■□□□□ 0.48
SMPD1-203ENST00000527275 FLOT2Q14254 428 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 C6orf132Q5T0Z8 1188 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 LAIR1Q6GTX8 287 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 KLHDC8AQ8IYD2 350 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 SUMF1Q8NBK3 374 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 OR2L8Q8NGY9 312 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 NRG4Q8WWG1 115 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 SELENOMQ8WWX9 145 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 SMPDL3AQ92484 453 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 VPS33AQ96AX1 596 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 SH3KBP1Q96B97 665 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 SRMSQ9H3Y6 488 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 ELOVL6Q9H5J4 265 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 IL1RL2Q9HB29 575 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 GID8Q9NWU2 228 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 EIF3LQ9Y262 564 aaKnown RBP18.06■□□□□ 0.48
SMPD1-203ENST00000527275 POLR3HQ9Y535 204 aaPredicted RBP18.06■□□□□ 0.48
SMPD1-203ENST00000527275 A0A1W2PPV9 198 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 CCDC154A6NI56 674 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 ZNF839A8K0R7 811 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 PRAMEF4O60810 478 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 CER1O95813 267 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 SHMT2P34897 504 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 YBX1P67809 324 aaKnown RBP18.06■□□□□ 0.48
SMPD1-203ENST00000527275 CHIT1Q13231 466 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 MAD2L1Q13257 205 aaPredicted RBP18.06■□□□□ 0.48
SMPD1-203ENST00000527275 PRAMEF9Q5VWM5 478 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 LRRC74BQ6ZQY2 392 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 TMEM26Q6ZUK4 368 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 FAM156AQ8NDB6 213 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 GPR156Q8NFN8 814 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 MAGEB10Q96LZ2 347 aaPredicted RBP18.06■□□□□ 0.48
SMPD1-203ENST00000527275 GPATCH1Q9BRR8 931 aaKnown RBP18.06■□□□□ 0.48
SMPD1-203ENST00000527275 SLC39A3Q9BRY0 314 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 LRTM1Q9HBL6 345 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 OR6C2Q9NZP2 312 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 SH2B3Q9UQQ2 575 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 KCNE2Q9Y6J6 123 aa18.06■□□□□ 0.48
SMPD1-203ENST00000527275 SEC22BO75396 215 aa18.05■□□□□ 0.48
SMPD1-203ENST00000527275 PSMB5P28074 263 aa18.05■□□□□ 0.48
SMPD1-203ENST00000527275 VHLP40337 213 aa18.05■□□□□ 0.48
SMPD1-203ENST00000527275 CCT8P50990 548 aa18.05■□□□□ 0.48
SMPD1-203ENST00000527275 NEIL2Q969S2 332 aa18.05■□□□□ 0.48
SMPD1-203ENST00000527275 PRRX2Q99811 253 aa18.05■□□□□ 0.48
SMPD1-203ENST00000527275 TAC3Q9UHF0 121 aa18.05■□□□□ 0.48
SMPD1-203ENST00000527275 PRORSD1PA6NEY8 169 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 ACOT8O14734 319 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 BCAS2O75934 225 aaPredicted RBP18.04■□□□□ 0.48
SMPD1-203ENST00000527275 NEK2P51955 445 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 SLC7A2P52569 658 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 C14orf28Q4W4Y0 310 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 SAMD4BQ5PRF9 694 aaKnown RBP18.04■□□□□ 0.48
SMPD1-203ENST00000527275 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.04■□□□□ 0.48
SMPD1-203ENST00000527275 PRAMEF13Q5VWM6 474 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 PRMT9Q6P2P2 845 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 MINDY1Q8N5J2 469 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 LRRC58Q96CX6 371 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 ACPTQ9BZG2 426 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 ACTL8Q9H568 366 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 C1orf109Q9NX04 203 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 SPHK1Q9NYA1 384 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 CD300AQ9UGN4 299 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 LNP1A1A4G5 178 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 E7EQ34 232 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 BTN3A3O00478 584 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 YKT6O15498 198 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 EEDO75530 441 aaKnown RBP18.04■□□□□ 0.48
SMPD1-203ENST00000527275 JUPP14923 745 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 IRF8Q02556 426 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 BIRC2Q13490 618 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 TRIM25Q14258 630 aaKnown RBP18.04■□□□□ 0.48
SMPD1-203ENST00000527275 LIPJQ5W064 366 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms