RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 DNAAF2Q9NVR5 837 aaKnown RBP13.8□□□□□ -0.2
COLCA2-202ENST00000526216 ARMCX1Q9P291 453 aa13.8□□□□□ -0.2
COLCA2-202ENST00000526216 PILRAQ9UKJ1 303 aa13.8□□□□□ -0.2
COLCA2-202ENST00000526216 SNX7Q9UNH6 387 aa13.8□□□□□ -0.2
COLCA2-202ENST00000526216 COPG1Q9Y678 874 aaKnown RBP13.8□□□□□ -0.2
COLCA2-202ENST00000526216 FOXE1O00358 373 aaPredicted RBP13.79□□□□□ -0.2
COLCA2-202ENST00000526216 OR1F1O43749 312 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 SH3BP5O60239 455 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 VPS4BO75351 444 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 RSL1D1O76021 490 aaKnown RBP13.79□□□□□ -0.2
COLCA2-202ENST00000526216 STATHP02808 62 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 ZNF806P0C7X5 589 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 HSD3B1P14060 373 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 NCF2P19878 526 aaPredicted RBP13.79□□□□□ -0.2
COLCA2-202ENST00000526216 HRH2P25021 359 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 CXCR2P25025 360 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 HSD3B2P26439 372 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 CD1CP29017 333 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 ALDH4A1P30038 563 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 PIK3CBP42338 1070 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 DIO3P55073 304 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 TBL3Q12788 808 aaKnown RBP13.79□□□□□ -0.2
COLCA2-202ENST00000526216 HYAL2Q12891 473 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 IMPG1Q17R60 797 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 AP5B1Q2VPB7 878 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 FAM91A1Q658Y4 838 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 IRGCQ6NXR0 463 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 FBXO42Q6P3S6 717 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 VN1R4Q7Z5H5 301 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 SPRED1Q7Z699 444 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 ZFAND4Q86XD8 727 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 CPSF7Q8N684 471 aaKnown RBP13.79□□□□□ -0.2
COLCA2-202ENST00000526216 Q8N9G6 341 aaPredicted RBP13.79□□□□□ -0.2
COLCA2-202ENST00000526216 MFSD9Q8NBP5 474 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 BAHD1Q8TBE0 780 aaPredicted RBP13.79□□□□□ -0.2
COLCA2-202ENST00000526216 UBE2E3Q969T4 207 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 REPS1Q96D71 796 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 FCRL1Q96LA6 429 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 TRAPPC9Q96Q05 1148 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 MAP3K3Q99759 626 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 MS4A8Q9BY19 250 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 PITHD1Q9GZP4 211 aaPredicted RBP13.79□□□□□ -0.2
COLCA2-202ENST00000526216 RAB33BQ9H082 229 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 KCNH6Q9H252 994 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 BRF2Q9HAW0 419 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 LRTM1Q9HBL6 345 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 AIG1Q9NVV5 245 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 TMEM9Q9P0T7 183 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 ANKMY1Q9P2S6 941 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 EPHA6Q9UF33 1036 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 ZFP69BQ9UJL9 534 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 PCDHGB2Q9Y5G2 931 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 PCDHGA4Q9Y5G9 962 aa13.79□□□□□ -0.2
COLCA2-202ENST00000526216 HEATR5BQ9P2D3 2071 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 EME2A4GXA9 379 aaPredicted RBP13.78□□□□□ -0.2
COLCA2-202ENST00000526216 CAPN14A8MX76 684 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 C4orf51C9J302 202 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 UBDO15205 165 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 CAPN5O15484 640 aaPredicted RBP13.78□□□□□ -0.2
COLCA2-202ENST00000526216 HCRTR1O43613 425 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 UBOX5O94941 541 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 FKBP9O95302 570 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 TGFB1P01137 390 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 GPR3P46089 330 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 ERVK-8P63133 956 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 SNRPNP63162 240 aaKnown RBP13.78□□□□□ -0.2
COLCA2-202ENST00000526216 RPL38P63173 70 aaKnown RBP13.78□□□□□ -0.2
COLCA2-202ENST00000526216 RAE1P78406 368 aaKnown RBP13.78□□□□□ -0.2
COLCA2-202ENST00000526216 CYP4F3Q08477 520 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 SPEM2Q0P670 501 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 ARMC6Q6NXE6 501 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 KLHL35Q6PF15 583 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 FAM92BQ6ZTR7 304 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 RNF44Q7L0R7 432 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 GBP7Q8N8V2 638 aaPredicted RBP13.78□□□□□ -0.2
COLCA2-202ENST00000526216 NCSTNQ92542 709 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 C11orf24Q96F05 449 aaPredicted RBP13.78□□□□□ -0.2
COLCA2-202ENST00000526216 CMTM7Q96FZ5 175 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 PPP3R2Q96LZ3 170 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 TGM7Q96PF1 710 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 LRRC37BQ96QE4 947 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 MACROD1Q9BQ69 325 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 OR51B5Q9H339 312 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 SEMA6CQ9H3T2 930 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 FAM60AQ9NP50 221 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 C1orf109Q9NX04 203 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 PPT2Q9UMR5 302 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 SLC12A4Q9UP95 1085 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 DLGAP4Q9Y2H0 992 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 POLR3HQ9Y535 204 aaPredicted RBP13.78□□□□□ -0.2
COLCA2-202ENST00000526216 GPR45Q9Y5Y3 372 aa13.78□□□□□ -0.2
COLCA2-202ENST00000526216 CPED1A4D0V7 1026 aa13.77□□□□□ -0.21
COLCA2-202ENST00000526216 SLC9B1P1A6NJY1 282 aa13.77□□□□□ -0.21
COLCA2-202ENST00000526216 ZW10O43264 779 aa13.77□□□□□ -0.21
COLCA2-202ENST00000526216 CCDC22O60826 627 aa13.77□□□□□ -0.21
COLCA2-202ENST00000526216 KLHL18O94889 574 aa13.77□□□□□ -0.21
COLCA2-202ENST00000526216 CTSBP07858 339 aa13.77□□□□□ -0.21
COLCA2-202ENST00000526216 CKMT1AP12532 417 aa13.77□□□□□ -0.21
COLCA2-202ENST00000526216 CD59P13987 128 aa13.77□□□□□ -0.21
COLCA2-202ENST00000526216 PNLIPP16233 465 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms