RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033		G3V2T6	193 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033		K7EQS6	105 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	RAMP2	O60895	175 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	NIPSNAP2	O75323	286 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	VPS26A	O75436	327 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	WDR47	O94967	919 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	INMT	O95050	263 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	APBB3	O95704	486 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	G6PD	P11413	515 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	ZNF16	P17020	682 aa	Predicted RBP	7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	FMO4	P31512	558 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	TGFBR2	P37173	567 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	MAP2K3	P46734	347 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	RGR	P47804	291 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	DGKQ	P52824	942 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	IST1	P53990	364 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	RAD23A	P54725	363 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	CXCR4	P61073	352 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	RING1	Q06587	406 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	ITK	Q08881	620 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	CDC20	Q12834	499 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	HYAL2	Q12891	473 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	FADD	Q13158	208 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	DMC1	Q14565	340 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	IMPG1	Q17R60	797 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	TRIM16L	Q309B1	348 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	FBXO48	Q5FWF7	155 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	LRIF1	Q5T3J3	769 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	HECTD3	Q5T447	861 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	SYT6	Q5T7P8	510 aa	Predicted RBP	7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	RAP1GAP2	Q684P5	730 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	IL31	Q6EBC2	164 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	CAPN13	Q6MZZ7	669 aa	Predicted RBP	7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	CRTC3	Q6UUV7	619 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	PRR23C	Q6ZRP0	262 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	NEK10	Q6ZWH5	1172 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	FRA10AC1	Q70Z53	315 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	GPR155	Q7Z3F1	870 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	PIWIL3	Q7Z3Z3	882 aa	Known RBP	7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	GPSM1	Q86YR5	675 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	DCP2	Q8IU60	420 aa	Known RBP	7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	ZDHHC13	Q8IUH4	622 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	PIANP	Q8IYJ0	282 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	HS3ST5	Q8IZT8	346 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	CLEC4F	Q8N1N0	589 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	CDYL2	Q8N8U2	506 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	FNDC5	Q8NAU1	212 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	PDZD8	Q8NEN9	1154 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	ZNF555	Q8NEP9	628 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	MDGA1	Q8NFP4	955 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	OR2T12	Q8NG77	320 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	OR52B6	Q8NGF0	335 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	OR6Q1	Q8NGQ2	317 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	NETO1	Q8TDF5	533 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	CHAC2	Q8WUX2	184 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	SLC13A3	Q8WWT9	602 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	OVCA2	Q8WZ82	227 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	KCNJ9	Q92806	393 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	FBXO32	Q969P5	355 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	TAMM41	Q96BW9	452 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	LINGO1	Q96FE5	620 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	LOXL4	Q96JB6	756 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	ZC3H10	Q96K80	434 aa	Known RBP	7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	PPP3R2	Q96LZ3	170 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	PPM1M	Q96MI6	270 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	HHIP	Q96QV1	700 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	PITX2	Q99697	317 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	ING2	Q9H160	280 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	DUSP21	Q9H596	190 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	IKZF5	Q9H5V7	419 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	CLMP	Q9H6B4	373 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	ACTR8	Q9H981	624 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	TMEM165	Q9HC07	324 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	ANKH	Q9HCJ1	492 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	HMG20A	Q9NP66	347 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	OLA1	Q9NTK5	396 aa	Known RBP	7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	DCAF13	Q9NV06	445 aa	Known RBP	7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	ATAD3A	Q9NVI7	634 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	VNN3	Q9NY84	501 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	SLC25A37	Q9NYZ2	338 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	DAPK2	Q9UIK4	370 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	TRMT6	Q9UJA5	497 aa	Known RBP	7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	FBXO10	Q9UK96	956 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	UTS2R	Q9UKP6	389 aa		7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	INTS6	Q9UL03	887 aa	Known RBP	7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	FAM32A	Q9Y421	112 aa	Known RBP	7.58	□□□□□ -1.2
SPIDR-223	ENST00000524033	C1orf232	A0A0U1RR37	186 aa		7.57	□□□□□ -1.2
SPIDR-223	ENST00000524033	LOC100130705	A0A1B0GUX0	176 aa		7.57	□□□□□ -1.2
SPIDR-223	ENST00000524033	UBA6	A0AVT1	1052 aa	Predicted RBP	7.57	□□□□□ -1.2
SPIDR-223	ENST00000524033	ELOVL7	A1L3X0	281 aa		7.57	□□□□□ -1.2
SPIDR-223	ENST00000524033	HTR3E	A5X5Y0	456 aa		7.57	□□□□□ -1.2
SPIDR-223	ENST00000524033	NPIPB8	E9PQR5	432 aa		7.57	□□□□□ -1.2
SPIDR-223	ENST00000524033	CXCR6	O00574	342 aa		7.57	□□□□□ -1.2
SPIDR-223	ENST00000524033	SCAMP3	O14828	347 aa	Known RBP	7.57	□□□□□ -1.2
SPIDR-223	ENST00000524033	SLC30A4	O14863	429 aa		7.57	□□□□□ -1.2
SPIDR-223	ENST00000524033	EREG	O14944	169 aa		7.57	□□□□□ -1.2
SPIDR-223	ENST00000524033	COCH	O43405	550 aa		7.57	□□□□□ -1.2
SPIDR-223	ENST00000524033	NDUFS3	O75489	264 aa		7.57	□□□□□ -1.2
SPIDR-223	ENST00000524033	PRKD3	O94806	890 aa		7.57	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms