RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 SPTA1P02549 2419 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 ATRXP46100 2492 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 PCM1Q15154 2024 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 A0A0J9YVX5 310 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 TRIM49D1C9J1S8 452 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 H0YIG0 161 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 STX16-NPEPL1H3BU86 382 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 STX16O14662 325 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 FOXS1O43638 330 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 UGDHO60701 494 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 PRAMEF4O60810 478 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 CNOT3O75175 753 aaKnown RBP10.98□□□□□ -0.65
SPIDR-212ENST00000519661 STK16O75716 305 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 NSA2O95478 260 aaKnown RBP10.98□□□□□ -0.65
SPIDR-212ENST00000519661 GUCA1CO95843 209 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 RBP1P09455 135 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 PIM1P11309 404 aaPredicted RBP10.98□□□□□ -0.65
SPIDR-212ENST00000519661 GRK3P35626 688 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 BCL6P41182 706 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 ALDH18A1P54886 795 aaKnown RBP10.98□□□□□ -0.65
SPIDR-212ENST00000519661 VSX2P58304 361 aaPredicted RBP10.98□□□□□ -0.65
SPIDR-212ENST00000519661 RPS15P62841 145 aaKnown RBP10.98□□□□□ -0.65
SPIDR-212ENST00000519661 NFKB2Q00653 900 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 IRF9Q00978 393 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 CDC16Q13042 620 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 SETDB1Q15047 1291 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 ADPRMQ3LIE5 342 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 THEMIS2Q5TEJ8 643 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 PRAMEF9Q5VWM5 478 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 NIPAL1Q6NVV3 410 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 KLC3Q6P597 504 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 C19orf48Q6RUI8 117 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 RAPH1Q70E73 1250 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 FRA10AC1Q70Z53 315 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 SPATA6LQ8N4H0 392 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 MR1Q95460 341 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 CLIP3Q96DZ5 547 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 MED8Q96G25 268 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 IP6K3Q96PC2 410 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 SPSB2Q99619 263 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 TMEM109Q9BVC6 243 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 ALG9Q9H6U8 611 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 TXLNGQ9NUQ3 528 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 DNAJC11Q9NVH1 559 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 DHCR7Q9UBM7 475 aaKnown RBP10.98□□□□□ -0.65
SPIDR-212ENST00000519661 RNF112Q9ULX5 631 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 CDC14AQ9UNH5 594 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 RUVBL1Q9Y265 456 aaKnown RBP10.98□□□□□ -0.65
SPIDR-212ENST00000519661 PADI2Q9Y2J8 665 aa10.98□□□□□ -0.65
SPIDR-212ENST00000519661 IQANK1A0A1B0GTG1 560 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 C9J4A7 227 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 P2RX6O15547 441 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 PRPF4O43172 522 aaKnown RBP eCLIP10.97□□□□□ -0.651e-8■■■■■ 32.2
SPIDR-212ENST00000519661 LCMT2O60294 686 aaKnown RBP10.97□□□□□ -0.65
SPIDR-212ENST00000519661 SERPINA6P08185 405 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 GSTA1P08263 222 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 SBK3P0C264 359 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 SMIM10L1P0DMW3 83 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 C1GALT1C1LP0DN25 315 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 CXCR2P25025 360 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 SOX8P57073 446 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 HYAL2Q12891 473 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 NKG7Q16617 165 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 PDK4Q16654 411 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 CATSPEREQ5SY80 951 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 ARHGAP40Q5TG30 622 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 FAM199XQ6PEV8 388 aaPredicted RBP10.97□□□□□ -0.65
SPIDR-212ENST00000519661 TTLL10Q6ZVT0 673 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 GSPT2Q8IYD1 628 aaKnown RBP10.97□□□□□ -0.65
SPIDR-212ENST00000519661 PLD6Q8N2A8 252 aaKnown RBP10.97□□□□□ -0.65
SPIDR-212ENST00000519661 ENDOVQ8N8Q3 282 aaKnown RBP10.97□□□□□ -0.65
SPIDR-212ENST00000519661 AMER3Q8N944 861 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 CAMKVQ8NCB2 501 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 TRPV3Q8NET8 790 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 TTLQ8NG68 377 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 CREB3L4Q8TEY5 395 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 RERGQ96A58 199 aaPredicted RBP10.97□□□□□ -0.65
SPIDR-212ENST00000519661 SMIM10Q96HG1 83 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 EGFL8Q99944 293 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 MRPL57Q9BQC6 102 aaKnown RBP10.97□□□□□ -0.65
SPIDR-212ENST00000519661 AIF1LQ9BQI0 150 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 CCDC77Q9BR77 488 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 EFCAB11Q9BUY7 163 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 SLC6A16Q9GZN6 736 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 DRC3Q9H069 523 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 ADNPQ9H2P0 1102 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 RHBGQ9H310 441 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 GEMIN8Q9NWZ8 242 aaKnown RBP10.97□□□□□ -0.65
SPIDR-212ENST00000519661 MKS1Q9NXB0 559 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 PPT2Q9UMR5 302 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 MAP4K5Q9Y4K4 846 aa10.97□□□□□ -0.65
SPIDR-212ENST00000519661 TNPO3Q9Y5L0 923 aaKnown RBP10.97□□□□□ -0.65
SPIDR-212ENST00000519661 BSNQ9UPA5 3926 aa10.96□□□□□ -0.65
SPIDR-212ENST00000519661 K7EPI3 171 aa10.96□□□□□ -0.65
SPIDR-212ENST00000519661 NKX2-8O15522 239 aa10.96□□□□□ -0.65
SPIDR-212ENST00000519661 CDH16O75309 829 aa10.96□□□□□ -0.65
SPIDR-212ENST00000519661 CEACAM4O75871 244 aa10.96□□□□□ -0.65
SPIDR-212ENST00000519661 WDR47O94967 919 aa10.96□□□□□ -0.65
SPIDR-212ENST00000519661 TBX6O95947 436 aaPredicted RBP10.96□□□□□ -0.65
SPIDR-212ENST00000519661 UMODP07911 640 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms