RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 FARSBQ9NSD9 589 aaKnown RBP9.45□□□□□ -0.9
CLN8-202ENST00000517514 STARD5Q9NSY2 213 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 SOHLH2Q9NX45 425 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 NKIRAS1Q9NYS0 192 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 ZDHHC2Q9UIJ5 367 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 KLK13Q9UKR3 277 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 MRPS2Q9Y399 296 aaKnown RBP9.45□□□□□ -0.9
CLN8-202ENST00000517514 LOXL2Q9Y4K0 774 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 ANGPTL3Q9Y5C1 460 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 TMEM233B4DJY2 109 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 B4E171 279 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 TMEM150CB9EJG8 249 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 C9orf172C9J069 976 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 H0YIV9 168 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 TMX2-CTNND1H3BSU7 103 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 FFAR3O14843 346 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 GPR42O15529 346 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 OR1F1O43749 312 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 UGDHO60701 494 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 CLDN9O95484 217 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 ETHE1O95571 254 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 ESRRBO95718 433 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 MLYCDO95822 493 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 OTCP00480 354 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 FGF5P12034 268 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 SERPINB3P29508 390 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 CSTF2P33240 577 aaKnown RBP eCLIP9.44□□□□□ -0.9
CLN8-202ENST00000517514 TSPAN7P41732 249 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 NEK2P51955 445 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 PKNOX1P55347 436 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 VSX2P58304 361 aaPredicted RBP9.44□□□□□ -0.9
CLN8-202ENST00000517514 ABCE1P61221 599 aaKnown RBP9.44□□□□□ -0.9
CLN8-202ENST00000517514 RPS15AP62244 130 aaKnown RBP9.44□□□□□ -0.9
CLN8-202ENST00000517514 OCRLQ01968 901 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 GALNT1Q10472 559 aaPredicted RBP9.44□□□□□ -0.9
CLN8-202ENST00000517514 FOXC1Q12948 553 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 ZRSR2Q15696 482 aaKnown RBP9.44□□□□□ -0.9
CLN8-202ENST00000517514 RBBP7Q16576 425 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 CPSF6Q16630 551 aaKnown RBP eCLIP9.44□□□□□ -0.9
CLN8-202ENST00000517514 HKDC1Q2TB90 917 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 TMIGD1Q6UXZ0 262 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 GPRIN3Q6ZVF9 776 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 ADCK2Q7Z695 626 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 MILR1Q7Z6M3 343 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 CUZD1Q86UP6 607 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 GALNT15Q8N3T1 639 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 CDYL2Q8N8U2 506 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 SLC38A9Q8NBW4 561 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 PPP4R1Q8TF05 950 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 ZNF473Q8WTR7 871 aaKnown RBP9.44□□□□□ -0.9
CLN8-202ENST00000517514 CKAP2Q8WWK9 683 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 GRAMD1AQ96CP6 724 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 C10orf90Q96M02 699 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 OR6C1Q96RD1 312 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 CTRCQ99895 268 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 TRMOQ9BU70 441 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 SPRY4Q9C004 299 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 TUBB1Q9H4B7 451 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 ACTR8Q9H981 624 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 MID1IP1Q9NPA3 183 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 FBXO8Q9NRD0 319 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 FGF21Q9NSA1 209 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 INTS9Q9NV88 658 aaKnown RBP9.44□□□□□ -0.9
CLN8-202ENST00000517514 TRPS1Q9UHF7 1281 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 HAO1Q9UJM8 370 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 PLCL2Q9UPR0 1127 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 SATB2Q9UPW6 733 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 TSC22D4Q9Y3Q8 395 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 TIMM22Q9Y584 194 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 AP1M2Q9Y6Q5 423 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 CCDC88CQ9P219 2028 aa9.44□□□□□ -0.9
CLN8-202ENST00000517514 FITM1A5D6W6 292 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 TMEM114B3SHH9 223 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 MANBAO00462 879 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 KLF11O14901 512 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 PLD2O14939 933 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 H2AFYO75367 372 aaKnown RBP9.43□□□□□ -0.9
CLN8-202ENST00000517514 B3GALT4O96024 378 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 JUNP05412 331 aaKnown RBP9.43□□□□□ -0.9
CLN8-202ENST00000517514 CAPN1P07384 714 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 FGF4P08620 206 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 ATXN8OSP0DMR3 200 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 SMIM10L1P0DMW3 83 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 ZNF28P17035 718 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 ITGAXP20702 1163 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 HNRNPH1P31943 449 aaKnown RBP9.43□□□□□ -0.9
CLN8-202ENST00000517514 AHRP35869 848 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 HNF4AP41235 474 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 SLC1A6P48664 564 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 GYS2P54840 703 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 NAA20P61599 178 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 CYP4F2P78329 520 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 ASPHQ12797 758 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 STX3Q13277 289 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 TUBB3Q13509 450 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 LAPTM5Q13571 262 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 NAA25Q14CX7 972 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 RBBP5Q15291 538 aaKnown RBP9.43□□□□□ -0.9
CLN8-202ENST00000517514 HSP90B2PQ58FF3 399 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 C3orf38Q5JPI3 329 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms