RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 SFTPDP35247 375 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 EIF2DP41214 584 aaKnown RBP2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 RPL34P49207 117 aaKnown RBP2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 PRKG2Q13237 762 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 RUNX3Q13761 415 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 CAPRIN1Q14444 709 aaKnown RBP2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 NONOQ15233 471 aaKnown RBP eCLIP2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 UPP1Q16831 310 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 PRR30Q53SZ7 412 aaPredicted RBP2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 C6orf163Q5TEZ5 329 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 CYB5D1Q6P9G0 228 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 REG3GQ6UW15 175 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 TMEM64Q6YI46 380 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 RAPH1Q70E73 1250 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 DET1Q7L5Y6 550 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 DNAAF5Q86Y56 855 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 SYT2Q8N9I0 419 aaPredicted RBP2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 TEX19Q8NA77 164 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 OR4C15Q8NGM1 316 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 PGM2Q96G03 612 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 NAP1L4Q99733 375 aaKnown RBP2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 OCR1Q9BZK8 76 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 LRRCC1Q9C099 1032 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 SLITRK2Q9H156 845 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 SDCBP2Q9H190 292 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 GHITMQ9H3K2 345 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 NOL11Q9H8H0 719 aaKnown RBP2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 RNF121Q9H920 327 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 PRMT7Q9NVM4 692 aaPredicted RBP2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 HAO2Q9NYQ3 351 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ZNF581Q9P0T4 197 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 NYAP2Q9P242 653 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 CPSF2Q9P2I0 782 aaKnown RBP2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 CRNNQ9UBG3 495 aaPredicted RBP2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 IL36AQ9UHA7 158 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 GTF3C4Q9UKN8 822 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 PLCL2Q9UPR0 1127 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 KIF25-AS1Q9Y6Z4 181 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 IL16Q14005 1332 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 RNF123Q5XPI4 1314 aa2.14□□□□□ -2.07
RNU6-1088P-201ENST00000516850 TRAV24A0A0B4J272 114 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 GLOD5A6NK44 160 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 TLX2O43763 284 aaPredicted RBP2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ENTPD3O75355 529 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ACSL3O95573 720 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ABCB1P08183 1280 aaPredicted RBP2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ATP6V1B1P15313 513 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 EPCAMP16422 314 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 LMO2P25791 158 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 CD27P26842 260 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ALDH1B1P30837 517 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 GPR183P32249 361 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 HOXD13P35453 343 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 LIG4P49917 911 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 CCR3P51677 355 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 HNRNPKP61978 463 aaKnown RBP eCLIP2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 PPIAP62937 165 aaKnown RBP2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 SRPXP78539 464 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ACY1Q03154 408 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 STK4Q13043 487 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 PTPRCAPQ14761 206 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 NPTX1Q15818 432 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 DUSP5Q16690 384 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 FAM106AQ4KMX7 169 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ATAD3CQ5T2N8 411 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ZBTB49Q6ZSB9 765 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 LINC00346Q8IVM7 164 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 AVL9Q8NBF6 648 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 NSUN4Q96CB9 384 aaKnown RBP2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ZNF830Q96NB3 372 aaPredicted RBP2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 KLHL5Q96PQ7 755 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 FEVQ99581 238 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 IL12RB2Q99665 862 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 CCDC106Q9BWC9 280 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 SLC2A11Q9BYW1 496 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 STRADBQ9C0K7 418 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ANKZF1Q9H8Y5 726 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 TBC1D7Q9P0N9 293 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 KLK11Q9UBX7 282 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 NAALAD2Q9Y3Q0 740 aa2.13□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ATRXP46100 2492 aa2.12□□□□□ -2.07
RNU6-1088P-201ENST00000516850 GON4LQ3T8J9 2241 aa2.12□□□□□ -2.07
RNU6-1088P-201ENST00000516850 hCG_38984A0A1B0GV85 526 aa2.12□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ARHGEF33A8MVX0 844 aa2.12□□□□□ -2.07
RNU6-1088P-201ENST00000516850 LY6G6DO95868 133 aa2.12□□□□□ -2.07
RNU6-1088P-201ENST00000516850 MT-ND1P03886 318 aa2.12□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ANPEPP15144 967 aa2.12□□□□□ -2.07
RNU6-1088P-201ENST00000516850 CAPN3P20807 821 aa2.12□□□□□ -2.07
RNU6-1088P-201ENST00000516850 GIFP27352 417 aa2.12□□□□□ -2.07
RNU6-1088P-201ENST00000516850 POLR2LP62875 67 aaKnown RBP2.12□□□□□ -2.07
RNU6-1088P-201ENST00000516850 RASGEF1BQ0VAM2 473 aa2.12□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ILF2Q12905 390 aaKnown RBP2.12□□□□□ -2.07
RNU6-1088P-201ENST00000516850 CUL4AQ13619 759 aa2.12□□□□□ -2.07
RNU6-1088P-201ENST00000516850 TMEM266Q2M3C6 531 aa2.12□□□□□ -2.07
RNU6-1088P-201ENST00000516850 ITPRIPL1Q6GPH6 555 aa2.12□□□□□ -2.07
RNU6-1088P-201ENST00000516850 PRSS55Q6UWB4 352 aaPredicted RBP2.12□□□□□ -2.07
RNU6-1088P-201ENST00000516850 CCBE1Q6UXH8 406 aaPredicted RBP2.12□□□□□ -2.07
RNU6-1088P-201ENST00000516850 C1orf122Q6ZSJ8 110 aa2.12□□□□□ -2.07
RNU6-1088P-201ENST00000516850 Q6ZVH6 145 aa2.12□□□□□ -2.07
RNU6-1088P-201ENST00000516850 PRR22Q8IZ63 422 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms