RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 ZNF37AP17032 561 aaPredicted RBP9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 HIST1H2ADP20671 130 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 SOX11P35716 441 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 TSFMP43897 325 aaKnown RBP9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 RPL21P46778 160 aaKnown RBP9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 AVPR1BP47901 424 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 EMP2P54851 167 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 MAT1AQ00266 395 aaKnown RBP9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 EEF1A2Q05639 463 aaKnown RBP9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 MGAT5Q09328 741 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 PDIA2Q13087 525 aaKnown RBP9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 MFAP5Q13361 173 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 MRPL49Q13405 166 aaKnown RBP9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 PCOLCEQ15113 449 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 NR6A1Q15406 480 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 FHL5Q5TD97 284 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 TMEM205Q6UW68 189 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 SBSNQ6UWP8 590 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 TMEM207Q6UWW9 146 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 SLC26A11Q86WA9 606 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 ZC3HC1Q86WB0 502 aaKnown RBP9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 ANKMY2Q8IV38 441 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 KBTBD2Q8IY47 623 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 ABHD11Q8NFV4 315 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 OR9A4Q8NGU2 314 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 ATL1Q8WXF7 558 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 PYCR2Q96C36 320 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 FBXL8Q96CD0 374 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 PDLIM5Q96HC4 596 aaKnown RBP9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 HIST1H2AHQ96KK5 128 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 PSMG3-AS1Q96PY0 264 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 OR4K3Q96R72 315 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 KRT12Q99456 494 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 HIST1H2AJQ99878 128 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 HAUS8Q9BT25 410 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 MCMBPQ9BTE3 642 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 H2AFJQ9BTM1 129 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 SARGQ9BW04 601 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 YIPF2Q9BWQ6 316 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 FAM129AQ9BZQ8 928 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 TRIM31Q9BZY9 425 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 ZNF700Q9H0M5 742 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 EPS8L2Q9H6S3 715 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 RIC8BQ9NVN3 520 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 ASF1BQ9NVP2 202 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 ARL15Q9NXU5 204 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 MOCS1Q9NZB8 636 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 MAP10Q9P2G4 905 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 IKZF3Q9UKT9 509 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 NTNG1Q9Y2I2 539 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 VWA7Q9Y334 891 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 NBPF19A0A087WUL8 3843 aa9.91□□□□□ -0.82
HMGXB3-205ENST00000514469 MAST4O15021 2626 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 FAM95CA0A1B0GW59 222 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 BLACEA4D250 179 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 PABPN1LA6NDY0 278 aaKnown RBP9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 LCMT2O60294 686 aaKnown RBP9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 AGFG2O95081 481 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 BMP10O95393 424 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 SERPINA7P05543 415 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 SLC35G6P0C7Q6 338 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 GP1BBP13224 206 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 IL1RNP18510 177 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 CXCR2P25025 360 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 CCR8P51685 355 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 ZNF169Q14929 603 aaPredicted RBP9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 B3GNTL1Q67FW5 361 aaPredicted RBP9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 FAAH2Q6GMR7 532 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 ISLR2Q6UXK2 745 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 RIPOR1Q6ZS17 1223 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 STRA8Q7Z7C7 330 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 ASPGQ86U10 573 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 PDSS2Q86YH6 399 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 ZBED8Q8IZ13 594 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 CISD2Q8N5K1 135 aaKnown RBP9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 MFSD9Q8NBP5 474 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 CAMKVQ8NCB2 501 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 OR4K1Q8NGD4 311 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 ZCCHC10Q8TBK6 192 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 SLC13A3Q8WWT9 602 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 PSMF1Q92530 271 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 ALKBH8Q96BT7 664 aaKnown RBP9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 MACROD1Q9BQ69 325 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 VN1R1Q9GZP7 353 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 NSMCE4AQ9NXX6 385 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 MKL2Q9ULH7 1088 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 SNX24Q9Y343 169 aa9.9□□□□□ -0.82
HMGXB3-205ENST00000514469 SHANK1Q9Y566 2161 aa9.9□□□□□ -0.83
HMGXB3-205ENST00000514469 NPEPPSL1A6NEC2 478 aa9.89□□□□□ -0.83
HMGXB3-205ENST00000514469 FAM187AA6NFU0 413 aa9.89□□□□□ -0.83
HMGXB3-205ENST00000514469 SEMA7AO75326 666 aa9.89□□□□□ -0.83
HMGXB3-205ENST00000514469 JRKO75564 520 aa9.89□□□□□ -0.83
HMGXB3-205ENST00000514469 KLHL18O94889 574 aa9.89□□□□□ -0.83
HMGXB3-205ENST00000514469 CBX6O95503 412 aa9.89□□□□□ -0.83
HMGXB3-205ENST00000514469 GUCA1CO95843 209 aa9.89□□□□□ -0.83
HMGXB3-205ENST00000514469 CELA2AP08217 269 aa9.89□□□□□ -0.83
HMGXB3-205ENST00000514469 C8orf89P0DMQ9 161 aa9.89□□□□□ -0.83
HMGXB3-205ENST00000514469 GRK3P35626 688 aa9.89□□□□□ -0.83
HMGXB3-205ENST00000514469 XCR1P46094 333 aa9.89□□□□□ -0.83
HMGXB3-205ENST00000514469 GLRBP48167 497 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms