RNA–Protein interactions for RNA: ENST00000514434.1

DDR1-275, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-275ENST00000514434 Q8NA96 180 aa12.4□□□□□ -0.42
DDR1-275ENST00000514434 KCT2Q8NC54 265 aa12.4□□□□□ -0.42
DDR1-275ENST00000514434 OR56A3Q8NH54 315 aa12.4□□□□□ -0.42
DDR1-275ENST00000514434 ANKRD49Q8WVL7 239 aa12.4□□□□□ -0.42
DDR1-275ENST00000514434 FBXL8Q96CD0 374 aa12.4□□□□□ -0.42
DDR1-275ENST00000514434 MVB12AQ96EY5 273 aa12.4□□□□□ -0.42
DDR1-275ENST00000514434 THOC3Q96J01 351 aaKnown RBP12.4□□□□□ -0.42
DDR1-275ENST00000514434 VPS39Q96JC1 886 aa12.4□□□□□ -0.42
DDR1-275ENST00000514434 TSNARE1Q96NA8 513 aa12.4□□□□□ -0.42
DDR1-275ENST00000514434 OR4K3Q96R72 315 aa12.4□□□□□ -0.42
DDR1-275ENST00000514434 HAUS8Q9BT25 410 aa12.4□□□□□ -0.42
DDR1-275ENST00000514434 RHOJQ9H4E5 214 aa12.4□□□□□ -0.42
DDR1-275ENST00000514434 CAB39LQ9H9S4 337 aa12.4□□□□□ -0.42
DDR1-275ENST00000514434 ZNF160Q9HCG1 818 aa12.4□□□□□ -0.42
DDR1-275ENST00000514434 HCN3Q9P1Z3 774 aa12.4□□□□□ -0.42
DDR1-275ENST00000514434 C5AR2Q9P296 337 aa12.4□□□□□ -0.42
DDR1-275ENST00000514434 TXNDC16Q9P2K2 825 aa12.4□□□□□ -0.42
DDR1-275ENST00000514434 MTO1Q9Y2Z2 717 aaKnown RBP12.4□□□□□ -0.42
DDR1-275ENST00000514434 FLNCQ14315 2725 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 IGLV3-12A0A075B6K2 115 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 IDSB3KWA1 339 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 SGK494L7N484 410 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 OR1F1O43749 312 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 JRKO75564 520 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 ENO2P09104 434 aaPredicted RBP12.39□□□□□ -0.43
DDR1-275ENST00000514434 CXCR2P25025 360 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 SLC26A3P40879 764 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 SLC7A5Q01650 507 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 FAM53BQ14153 422 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 ESPL1Q14674 2120 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 INPP5JQ15735 1006 aaPredicted RBP12.39□□□□□ -0.43
DDR1-275ENST00000514434 PLEKHN1Q494U1 663 aaPredicted RBP12.39□□□□□ -0.43
DDR1-275ENST00000514434 SBSNQ6UWP8 590 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 C3orf62Q6ZUJ4 267 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 FRA10AC1Q70Z53 315 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 ASPGQ86U10 573 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 ZC3H7AQ8IWR0 971 aaKnown RBP12.39□□□□□ -0.43
DDR1-275ENST00000514434 CTAGE3PQ8IX95 158 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 ZADH2Q8N4Q0 377 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 NKAPQ8N5F7 415 aaKnown RBP12.39□□□□□ -0.43
DDR1-275ENST00000514434 CAMKVQ8NCB2 501 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 ZNF740Q8NDX6 193 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 SLC13A3Q8WWT9 602 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 ATL1Q8WXF7 558 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 CDKL2Q92772 493 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 PNPLA2Q96AD5 504 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 NACC2Q96BF6 587 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 PDLIM5Q96HC4 596 aaKnown RBP12.39□□□□□ -0.43
DDR1-275ENST00000514434 VPS50Q96JG6 964 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 C16orf45Q96MC5 204 aaPredicted RBP12.39□□□□□ -0.43
DDR1-275ENST00000514434 EGFL8Q99944 293 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 RAB17Q9H0T7 212 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 GPAMQ9HCL2 828 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 MKKSQ9NPJ1 570 aaPredicted RBP12.39□□□□□ -0.43
DDR1-275ENST00000514434 NSMCE4AQ9NXX6 385 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 CTNNAL1Q9UBT7 734 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 MKL2Q9ULH7 1088 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 PTPN13Q12923 2485 aa12.39□□□□□ -0.43
DDR1-275ENST00000514434 UBR5O95071 2799 aaPredicted RBP12.39□□□□□ -0.43
DDR1-275ENST00000514434 NUP210LQ5VU65 1888 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 ASH1LQ9NR48 2969 aaKnown RBP12.38□□□□□ -0.43
DDR1-275ENST00000514434 SHANK1Q9Y566 2161 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 KCNE1BA0A087WTH5 132 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 NSG1A0A0A6YYJ2 146 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 TCRBV9S1A1TA0A576 114 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 ESYT3A0FGR9 886 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 OR2W5A6NFC9 320 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 ZNF860A6NHJ4 632 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 NCF1BA6NI72 391 aaPredicted RBP12.38□□□□□ -0.43
DDR1-275ENST00000514434 NCF1CA8MVU1 366 aaPredicted RBP12.38□□□□□ -0.43
DDR1-275ENST00000514434 EIF3HO15372 352 aaKnown RBP eCLIP12.38□□□□□ -0.43
DDR1-275ENST00000514434 PHGDHO43175 533 aaKnown RBP12.38□□□□□ -0.43
DDR1-275ENST00000514434 VPS4BO75351 444 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 IPO13O94829 963 aaKnown RBP12.38□□□□□ -0.43
DDR1-275ENST00000514434 SORBS2O94875 1100 aaKnown RBP12.38□□□□□ -0.43
DDR1-275ENST00000514434 NCF1P14598 390 aaPredicted RBP12.38□□□□□ -0.43
DDR1-275ENST00000514434 UQCRFS1P47985 274 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 Q0VFX4 171 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 CSHL1Q14406 222 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 USP10Q14694 798 aaKnown RBP12.38□□□□□ -0.43
DDR1-275ENST00000514434 TSNQ15631 228 aaKnown RBP12.38□□□□□ -0.43
DDR1-275ENST00000514434 C18orf21Q32NC0 220 aaPredicted RBP12.38□□□□□ -0.43
DDR1-275ENST00000514434 MINDY4Q4G0A6 757 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 AGAP7PQ5VUJ5 663 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 TMEM214Q6NUQ4 689 aaKnown RBP12.38□□□□□ -0.43
DDR1-275ENST00000514434 THOC6Q86W42 341 aaKnown RBP12.38□□□□□ -0.43
DDR1-275ENST00000514434 HPS6Q86YV9 775 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 AMER2Q8N7J2 671 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 MFSD9Q8NBP5 474 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 FBXO25Q8TCJ0 367 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 SLC5A11Q8WWX8 675 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 TM9SF4Q92544 642 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 ZNF592Q92610 1267 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 NEIL2Q969S2 332 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 THAP11Q96EK4 314 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 MOCOSQ96EN8 888 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 AGAP4Q96P64 663 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 ILKAPQ9H0C8 392 aaPredicted RBP12.38□□□□□ -0.43
DDR1-275ENST00000514434 SPNS1Q9H2V7 528 aa12.38□□□□□ -0.43
DDR1-275ENST00000514434 ANKHQ9HCJ1 492 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms