RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 CUL3Q13618 768 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 RBBP5Q15291 538 aaKnown RBP16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 RPS6KA2Q15349 733 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 AP5B1Q2VPB7 878 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 SGO1Q5FBB7 561 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 TCHHL1Q5QJ38 904 aaPredicted RBP16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 C6orf136Q5SQH8 315 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 PRAMEF9Q5VWM5 478 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 ZNF425Q6IV72 752 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 C6orf89Q6UWU4 347 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 ZFAND4Q86XD8 727 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 PLXDC1Q8IUK5 500 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 MINDY1Q8N5J2 469 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 CPSF7Q8N684 471 aaKnown RBP16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 SRFBP1Q8NEF9 429 aaKnown RBP16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 HUS1BQ8NHY5 278 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 TBC1D10AQ9BXI6 508 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 ACPTQ9BZG2 426 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 MYLK2Q9H1R3 596 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 SEMA6CQ9H3T2 930 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 DMRT3Q9NQL9 472 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 C1GALT1Q9NS00 363 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 DNAAF2Q9NVR5 837 aaKnown RBP16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 CUEDC1Q9NWM3 386 aaPredicted RBP16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 SH2B3Q9UQQ2 575 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 GPR179Q6PRD1 2367 aa16.06■□□□□ 0.16
SCAMP1-203ENST00000510030 OR2A25A4D2G3 310 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 TLCD2A6NGC4 264 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 PATE3B3GLJ2 98 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 FLRT2O43155 660 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 OR1F1O43749 312 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 SEC22BO75396 215 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 ZNF806P0C7X5 589 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 GIMD1P0DJR0 217 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 PRPS2P11908 318 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 GRIA3P42263 894 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 SCTRP47872 440 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 ACADVLP49748 655 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 RASSF2P50749 326 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 TGM3Q08188 693 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 ACSM2AQ08AH3 577 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 DDX39BQ13838 428 aaKnown RBP16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 KRT72Q14CN4 511 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 GALNTL6Q49A17 601 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 TMEM35AQ53FP2 167 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 ACSM2BQ68CK6 577 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 Q6ZSR9 355 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 PAGE2Q7Z2X7 111 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 FITM2Q8N6M3 262 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 JPH3Q8WXH2 748 aaPredicted RBP16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 STARD8Q92502 1023 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 CMTM5Q96DZ9 223 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 C3orf30Q96M34 536 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 QRFPRQ96P65 431 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 MTERF1Q99551 399 aaKnown RBP16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 NLNQ9BYT8 704 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 NMUR2Q9GZQ4 415 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 CHRNA10Q9GZZ6 450 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 ZMYND15Q9H091 742 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 SLC6A20Q9NP91 592 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 TXLNGQ9NUQ3 528 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 SLC12A4Q9UP95 1085 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 RUVBL1Q9Y265 456 aaKnown RBP16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 RNF215Q9Y6U7 377 aa16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 EP300Q09472 2414 aaPredicted RBP16.05■□□□□ 0.16
SCAMP1-203ENST00000510030 DYTNA2CJ06 578 aa16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 URADA6NGE7 173 aa16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 TXNDC9O14530 226 aa16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 TOX3O15405 576 aaPredicted RBP16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 PEX11AO75192 247 aa16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 SLC35G6P0C7Q6 338 aa16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 CDH3P22223 829 aa16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 PRDX6P30041 224 aa16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 GSTM5P46439 218 aa16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 ZC3H12BQ5HYM0 836 aaKnown RBP16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 MANEAQ5SRI9 462 aa16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 KIAA1614Q5VZ46 1190 aa16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 WDR74Q6RFH5 385 aaPredicted RBP16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 ZNF771Q7L3S4 317 aaPredicted RBP16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 PAQR7Q86WK9 346 aa16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 GATAD2AQ86YP4 633 aa16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 MIER2Q8N344 545 aa16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 MFSD9Q8NBP5 474 aa16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 FLVCR1-AS1Q8TAF5 88 aa16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 BAHD1Q8TBE0 780 aaPredicted RBP16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 RSC1A1Q92681 617 aa16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 APOLD1Q96LR9 279 aa16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 ABCG4Q9H172 646 aa16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 FARSBQ9NSD9 589 aaKnown RBP16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 SIRT5Q9NXA8 310 aa16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 CCL27Q9Y4X3 112 aa16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 AP1M2Q9Y6Q5 423 aa16.04■□□□□ 0.16
SCAMP1-203ENST00000510030 SDK1Q7Z5N4 2213 aa16.03■□□□□ 0.16
SCAMP1-203ENST00000510030 IGHV1OR21-1A0A087WYE8 117 aa16.03■□□□□ 0.16
SCAMP1-203ENST00000510030 IGKV1-8A0A0C4DH67 115 aa16.03■□□□□ 0.16
SCAMP1-203ENST00000510030 EME2A4GXA9 379 aaPredicted RBP16.03■□□□□ 0.16
SCAMP1-203ENST00000510030 MAGEB17A8MXT2 336 aa16.03■□□□□ 0.16
SCAMP1-203ENST00000510030 SIGLEC6O43699 453 aa16.03■□□□□ 0.16
SCAMP1-203ENST00000510030 TYRP1P17643 537 aa16.03■□□□□ 0.16
SCAMP1-203ENST00000510030 DDX5P17844 614 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms