RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 C5AR2Q9P296 337 aa14.06□□□□□ -0.16
UBE2D3-228ENST00000508974 MAP4K5Q9Y4K4 846 aa14.06□□□□□ -0.16
UBE2D3-228ENST00000508974 CSAG2Q9Y5P2 127 aa14.06□□□□□ -0.16
UBE2D3-228ENST00000508974 SCN2AQ99250 2005 aa14.06□□□□□ -0.16
UBE2D3-228ENST00000508974 IGLV3-12A0A075B6K2 115 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 FAM187AA6NFU0 413 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 LCMT2O60294 686 aaKnown RBP14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 JRKO75564 520 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 SERPIND1P05546 499 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 NPPBP16860 134 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 ZNF37AP17032 561 aaPredicted RBP14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 CCND1P24385 295 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 HRH2P25021 359 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 SLC26A3P40879 764 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 AVPR1BP47901 424 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 EMP2P54851 167 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 EMP3P54852 163 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 TAS2R39P59534 338 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 Q0VFX4 171 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 FRG1Q14331 258 aaKnown RBP14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 DUPD1Q68J44 220 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 LINC00696Q6ZRV3 163 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 SLC26A11Q86WA9 606 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 CCDC25Q86WR0 208 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 HPS6Q86YV9 775 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 CEP97Q8IW35 865 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 ZADH2Q8N4Q0 377 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 KCT2Q8NC54 265 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 NACC2Q96BF6 587 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 C19orf60Q96EN9 201 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 MVB12AQ96EY5 273 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 OR4K3Q96R72 315 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 CAB39LQ9H9S4 337 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 MKKSQ9NPJ1 570 aaPredicted RBP14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 MOCS1Q9NZB8 636 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 MKL2Q9ULH7 1088 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 B3GNT3Q9Y2A9 372 aa14.05□□□□□ -0.16
UBE2D3-228ENST00000508974 NSG1A0A0A6YYJ2 146 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 CXorf49A8MYA2 514 aaPredicted RBP14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 SGK494L7N484 410 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 OR1F1O43749 312 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 IPO13O94829 963 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 UQCRHP07919 91 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 CXCR2P25025 360 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 GRK3P35626 688 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 EFNA3P52797 238 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 AP1S2P56377 157 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 SOX8P57073 446 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 ETF1P62495 437 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 RELAQ04206 551 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 CATSPEREQ5SY80 951 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 SBSNQ6UWP8 590 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 MAATS1Q7Z4T9 603 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 ASPGQ86U10 573 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 ZC3H7AQ8IWR0 971 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 IQCKQ8N0W5 287 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 SPATA6LQ8N4H0 392 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 CISD2Q8N5K1 135 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 ZNF740Q8NDX6 193 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 OR56A3Q8NH54 315 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 ANKRD49Q8WVL7 239 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 SLC13A3Q8WWT9 602 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 TM9SF4Q92544 642 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 FBXL8Q96CD0 374 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 MOCOSQ96EN8 888 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 VPS39Q96JC1 886 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 VPS50Q96JG6 964 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 CNDP1Q96KN2 507 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 EGFL8Q99944 293 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 HAUS8Q9BT25 410 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 RBCK1Q9BYM8 510 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 LHPPQ9H008 270 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 GPAMQ9HCL2 828 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 C14orf105Q9NVL8 296 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 GRHL1Q9NZI5 618 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 WHRNQ9P202 907 aa14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 MTO1Q9Y2Z2 717 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-228ENST00000508974 DOPEY2Q9Y3R5 2298 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 OR2W5A6NFC9 320 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 ZNF860A6NHJ4 632 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 NDC80O14777 642 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 NDUFS4O43181 175 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 KLHL41O60662 606 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 RDH16O75452 317 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 HPP00738 406 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 CELA2AP08217 269 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 ENO2P09104 434 aaPredicted RBP14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 COX6A1P12074 109 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 GLRBP48167 497 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 CCR8P51685 355 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 SLC12A2P55011 1212 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 PLTPP55058 493 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 SRSF1Q07955 248 aaKnown RBP eCLIP14.03□□□□□ -0.162e-8■□□□□ 10.6
UBE2D3-228ENST00000508974 FAM53BQ14153 422 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 UBAP2LQ14157 1087 aaKnown RBP14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 TRADDQ15628 312 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 TSNQ15631 228 aaKnown RBP14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 PPP1R3AQ16821 1122 aa14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 C18orf21Q32NC0 220 aaPredicted RBP14.03□□□□□ -0.16
UBE2D3-228ENST00000508974 MINDY4Q4G0A6 757 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms