RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 NKAPQ8N5F7 415 aaKnown RBP5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 CLDN19Q8N6F1 224 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 PPM1NQ8N819 430 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 OR4C6Q8NH72 309 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 MAGEC3Q8TD91 643 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 LMX1AQ8TE12 382 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 SLC44A1Q8WWI5 657 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 ELMO1Q92556 727 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 INPP5DQ92835 1189 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 SH3KBP1Q96B97 665 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 MTBPQ96DY7 904 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 PDLIM5Q96HC4 596 aaKnown RBP5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 CABS1Q96KC9 395 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 FOPNLQ96NB1 174 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 LRRC37BQ96QE4 947 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 GPR22Q99680 433 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 DPYSL5Q9BPU6 564 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 SOX7Q9BT81 388 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 LRRC61Q9BV99 259 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 TMEM109Q9BVC6 243 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 GTPBP2Q9BX10 602 aaKnown RBP5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 KRTAP4-5Q9BYR2 181 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 KRTAP3-1Q9BYR8 98 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 STN1Q9H668 368 aaKnown RBP5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 COG4Q9H9E3 785 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 UCK1Q9HA47 277 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 ARFGAP3Q9NP61 516 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 MRPL40Q9NQ50 206 aaKnown RBP5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 FBXO6Q9NRD1 293 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 KLC4Q9NSK0 619 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 IL1RAPL1Q9NZN1 696 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 TAAR2Q9P1P5 351 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 SCOCQ9UIL1 159 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 ST6GALNAC2Q9UJ37 374 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 CRYL1Q9Y2S2 319 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 DHRS7Q9Y394 339 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 PRSS21Q9Y6M0 314 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 COLEC10Q9Y6Z7 277 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 ANKRD12Q6UB98 2062 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 PCM1Q15154 2024 aa5.34□□□□□ -1.55
HMGB1P44-201ENST00000508597 DNAH14Q0VDD8 3507 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 A6NCN8 305 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 NPEPPSL1A6NEC2 478 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 CXorf49A8MYA2 514 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 FOXS1O43638 330 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 NUDT21O43809 227 aaKnown RBP5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 CDH16O75309 829 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 FAM155BO75949 473 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 IL33O95760 270 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 ITGA2BP08514 1039 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 SNRPAP09012 282 aaKnown RBP5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 SLC35G4P0C7Q5 338 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 MPC1LP0DKB6 136 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 STMN1P16949 149 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 CSRP1P21291 193 aaKnown RBP5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 FDXRP22570 491 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 CCR7P32248 378 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 HSD17B3P37058 310 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 FASLGP48023 281 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 NRG3P56975 720 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 MEF2AQ02078 507 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 HGFACQ04756 655 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 ILKQ13418 452 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 C1orf61Q13536 156 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 GBX1Q14549 363 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 SF3A2Q15428 464 aaKnown RBP5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 ADRM1Q16186 407 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 CCDC6Q16204 474 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 CLPPQ16740 277 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 SYTL3Q4VX76 610 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 ZNF542PQ5EBM4 170 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 CTSL3PQ5NE16 218 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 STPG1Q5TH74 334 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 HECTD2Q5U5R9 776 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 CAPRIN2Q6IMN6 1127 aaKnown RBP5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 TCEAL6Q6IPX3 200 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 ZNF549Q6P9A3 640 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 TTC23LQ6PF05 361 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 IYDQ6PHW0 289 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 CNSTQ6PJW8 725 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 UNC5DQ6UXZ4 953 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 KDM7AQ6ZMT4 941 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 TIFABQ6ZNK6 161 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 GLRX5Q86SX6 157 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 LDB1Q86U70 411 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 LCA5Q86VQ0 697 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 C17orf82Q86X59 251 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 NRROSQ86YC3 692 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 WDR75Q8IWA0 830 aaKnown RBP5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 CFAP206Q8IYR0 622 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 SLC22A15Q8IZD6 547 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 SLC25A45Q8N413 288 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 SFRP1Q8N474 314 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 DCLK2Q8N568 766 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 ZBTB2Q8N680 514 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 ARL10Q8N8L6 244 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 GPATCH11Q8N954 259 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 FAM46DQ8NEK8 389 aa5.33□□□□□ -1.56
HMGB1P44-201ENST00000508597 GPR156Q8NFN8 814 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms