RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 TMEM200AQ86VY9 491 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 KRT222Q8N1A0 295 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 SLC5A8Q8N695 610 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 PEX13Q92968 403 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 RERGQ96A58 199 aaPredicted RBP8.85□□□□□ -0.99
NEDD9-211ENST00000508546 FOPNLQ96NB1 174 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 PANX3Q96QZ0 392 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 FAM118BQ9BPY3 351 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 ACAT2Q9BWD1 397 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 CCM2LQ9NUG4 571 aaPredicted RBP8.85□□□□□ -0.99
NEDD9-211ENST00000508546 ABHD10Q9NUJ1 306 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 ANKRD10Q9NXR5 420 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 LRFN1Q9P244 771 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 SLC2A6Q9UGQ3 507 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 PCDHA3Q9Y5H8 950 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 TLN2Q9Y4G6 2542 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 P2RX6O15547 441 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 NME2P1O60361 137 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 MAN1A2O60476 641 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 SLC25A12O75746 678 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 TJP3O95049 919 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 MATN4O95460 622 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 NSA2O95478 260 aaKnown RBP8.84□□□□□ -0.99
NEDD9-211ENST00000508546 TPM3P06753 285 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 NME2P22392 152 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 CTNNA1P35221 906 aaKnown RBP8.84□□□□□ -0.99
NEDD9-211ENST00000508546 PTGS2P35354 604 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 AVPR1BP47901 424 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 TTPAP49638 278 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 PRAMEP78395 509 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 MAT1AQ00266 395 aaKnown RBP8.84□□□□□ -0.99
NEDD9-211ENST00000508546 OC90Q02509 493 aaPredicted RBP8.84□□□□□ -0.99
NEDD9-211ENST00000508546 PRDX1Q06830 199 aaKnown RBP8.84□□□□□ -0.99
NEDD9-211ENST00000508546 CDH17Q12864 832 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 PTK6Q13882 451 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 ARHGAP19Q14CB8 494 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 CEBPEQ15744 281 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 MAPKAPK3Q16644 382 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 AARS2Q5JTZ9 985 aaKnown RBP8.84□□□□□ -0.99
NEDD9-211ENST00000508546 PTRHD1Q6GMV3 140 aaKnown RBP8.84□□□□□ -0.99
NEDD9-211ENST00000508546 OTOAQ7RTW8 1153 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 ANKRD37Q7Z713 158 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 MARVELD2Q8N4S9 558 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 TAB3Q8N5C8 712 aaPredicted RBP8.84□□□□□ -0.99
NEDD9-211ENST00000508546 POGLUT1Q8NBL1 392 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 OR52K1Q8NGK4 314 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 OR6P1Q8NGX9 317 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 FAM57AQ8TBR7 257 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 SMPDL3AQ92484 453 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 TRIM45Q9H8W5 580 aaPredicted RBP8.84□□□□□ -0.99
NEDD9-211ENST00000508546 KCNJ16Q9NPI9 418 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 GNPTGQ9UJJ9 305 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 RUVBL2Q9Y230 463 aaKnown RBP8.84□□□□□ -0.99
NEDD9-211ENST00000508546 RNF6Q9Y252 685 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 HRNRQ86YZ3 2850 aaPredicted RBP8.84□□□□□ -0.99
NEDD9-211ENST00000508546 MXRA5Q9NR99 2828 aa8.84□□□□□ -0.99
NEDD9-211ENST00000508546 NKX2-6A6NCS4 301 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 ERI2A8K979 691 aaKnown RBP8.83□□□□□ -1
NEDD9-211ENST00000508546 CCNDBP1O95273 360 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 GAS8O95995 478 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 TPOP07202 933 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 ADRA1DP25100 572 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 ATP5DP30049 168 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 PTGER1P34995 402 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 RPA3P35244 121 aaPredicted RBP8.83□□□□□ -1
NEDD9-211ENST00000508546 TAS2R50P59544 299 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 GBX1Q14549 363 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 MINDY4Q4G0A6 757 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 ANKRD20A4Q4UJ75 823 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 MFSD4BQ5TF39 518 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 ICE2Q659A1 982 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 PAPD4Q6PIY7 484 aaKnown RBP8.83□□□□□ -1
NEDD9-211ENST00000508546 SUSD1Q6UWL2 747 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 CEP128Q6ZU80 1094 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 CD163Q86VB7 1156 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 LRRC6Q86X45 466 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 CPSF7Q8N684 471 aaKnown RBP8.83□□□□□ -1
NEDD9-211ENST00000508546 FAM71DQ8N9W8 422 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 SPC24Q8NBT2 197 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 OR9A1PQ8NGU1 263 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 OR9A4Q8NGU2 314 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 OR51Q1Q8NH59 317 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 NUDT8Q8WV74 236 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 SKA2Q8WVK7 121 aaPredicted RBP8.83□□□□□ -1
NEDD9-211ENST00000508546 RND1Q92730 232 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 ZNF778Q96MU6 729 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 LPAR4Q99677 370 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 P2RY12Q9H244 342 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 TP63Q9H3D4 680 aaPredicted RBP8.83□□□□□ -1
NEDD9-211ENST00000508546 PLSCR2Q9NRY7 297 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 PCYOX1Q9UHG3 505 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 ANAPC5Q9UJX4 755 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 HRH3Q9Y5N1 445 aa8.83□□□□□ -1
NEDD9-211ENST00000508546 A0A1B0GTH9 108 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 FAM90A27PA6NNH2 459 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 ZNF839A8K0R7 811 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 MYO1CO00159 1063 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 WIPF1O43516 503 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 KLK8O60259 260 aa8.82□□□□□ -1
NEDD9-211ENST00000508546 MFAP3LO75121 409 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms