RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 PRMT9Q6P2P2 845 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 CCBE1Q6UXH8 406 aaPredicted RBP4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 ZBTB49Q6ZSB9 765 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 RFX8Q6ZV50 586 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 PRSS48Q7RTY5 328 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 ATG9AQ7Z3C6 839 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 LUZP2Q86TE4 346 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 SLC26A11Q86WA9 606 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 KATNAL2Q8IYT4 538 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 TDHQ8IZJ6 230 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 SLC25A41Q8N5S1 370 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 CCDC185Q8N715 623 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 FAM47BQ8NA70 645 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 ATAD1Q8NBU5 361 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 OR7A2PQ8NGA2 310 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 SPATA3Q8NHX4 192 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 ZNF564Q8TBZ8 553 aaPredicted RBP4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 PROX1Q92786 737 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 SLC25A28Q96A46 364 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 ZUFSPQ96AP4 578 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 CCDC124Q96CT7 223 aaKnown RBP4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 FEM1CQ96JP0 617 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 SLC45A3Q96JT2 553 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 BTN2A3PQ96KV6 586 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 C9orf72Q96LT7 481 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 OPALINQ96PE5 141 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 FCRL5Q96RD9 977 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 BBS4Q96RK4 519 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 EYA3Q99504 573 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 C17orf62Q9BQA9 187 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 TMEM121Q9BTD3 319 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 CINPQ9BW66 212 aaPredicted RBP4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 CALN1Q9BXU9 219 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 NYXQ9GZU5 481 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 PPA2Q9H2U2 334 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 MMP27Q9H306 513 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 ZHX3Q9H4I2 956 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 PDZD7Q9H5P4 517 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 JMJD4Q9H9V9 463 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 ZNF556Q9HAH1 456 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 SAP30LQ9HAJ7 183 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 MRPL47Q9HD33 250 aaKnown RBP4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 PAK1IP1Q9NWT1 392 aaPredicted RBP4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 PTTG3PQ9NZH4 202 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 SEMA5BQ9P283 1151 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 ARMCX1Q9P291 453 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 TXNDC16Q9P2K2 825 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 MTRRQ9UBK8 725 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 POLLQ9UGP5 575 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 TRMT6Q9UJA5 497 aaKnown RBP4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 CPSF3Q9UKF6 684 aaKnown RBP4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 POU2F3Q9UKI9 436 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 BAG5Q9UL15 447 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 AP3M1Q9Y2T2 418 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 PLLPQ9Y342 182 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 RBMX2Q9Y388 322 aaKnown RBP4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 KCNE2Q9Y6J6 123 aa4.44□□□□□ -1.7
PDLIM5-211ENST00000508531 LAMA2P24043 3122 aaKnown RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 SCN7AQ01118 1682 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 A0A1W2PRG6 482 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 SLC22A23A1A5C7 686 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 TUBAL3A6NHL2 446 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 OR6C65A6NJZ3 312 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 AQP12BA6NM10 295 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 E7ESA3 106 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 F5H6K3 240 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 LOC110117498-PIK3R3F6TDL0 507 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 GTPBP1O00178 669 aaKnown RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 PLK4O00444 970 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 TFECO14948 347 aaPredicted RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 PMM2O15305 246 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 EIF3DO15371 548 aaKnown RBP eCLIP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 NDUFA2O43678 99 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 UGT2B11O75310 529 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 GLRA3O75311 464 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 SUPT7LO94864 414 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 MFN2O95140 757 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 OR5F1O95221 314 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 NDST3O95803 873 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 HLA-DRAP01903 254 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 SLC4A1P02730 911 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 SERPINE1P05121 402 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 FGF2P09038 288 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 TMIGD3P0DMS9 266 aaPredicted RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 DLATP10515 647 aaKnown RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 TCN1P20061 433 aaPredicted RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 C4BPBP20851 252 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 BGNP21810 368 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 RRM1P23921 792 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 KLRC2P26717 231 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 PIK3R1P27986 724 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 RPL9P32969 192 aaKnown RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 HADHAP40939 763 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 CASP3P42574 277 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 MAGEA11P43364 429 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 PTPN9P43378 593 aa4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 NSFP46459 744 aaKnown RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 EIF3EP60228 445 aaKnown RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 WDR5P61964 334 aaKnown RBP4.43□□□□□ -1.7
PDLIM5-211ENST00000508531 SNRPFP62306 86 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms