RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 MBOAT1Q6ZNC8 495 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 LANCL3Q6ZV70 420 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 NAT8LQ8N9F0 302 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 ZCCHC10Q8TBK6 192 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 METTL21AQ8WXB1 218 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 PBKQ96KB5 322 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 SIGLEC10Q96LC7 697 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 IMMP1LQ96LU5 166 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 MACROD1Q9BQ69 325 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 TUBB6Q9BUF5 446 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 VN1R1Q9GZP7 353 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 RNF32Q9H0A6 362 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 IARS2Q9NSE4 1012 aaKnown RBP10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 HCN3Q9P1Z3 774 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 TRMT6Q9UJA5 497 aaKnown RBP10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 ADAMTS6Q9UKP5 1117 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 PDE10AQ9Y233 779 aa10.92□□□□□ -0.66
HMGCS1-204ENST00000507293 FEZF1A0PJY2 475 aa10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 OR5H15A6NDH6 313 aa10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 EIF3FO00303 357 aaPredicted RBP10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 C8GP07360 202 aa10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 ICAM2P13598 275 aa10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 HRH2P25021 359 aa10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 BCL6P41182 706 aa10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 XCR1P46094 333 aa10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 CSNK1G2P78368 415 aa10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 SRSF11Q05519 484 aaKnown RBP10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 PTK6Q13882 451 aa10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 LRRC8EQ6NSJ5 796 aa10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 TMEM214Q6NUQ4 689 aaKnown RBP10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 UGT3A1Q6NUS8 523 aa10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 GFRALQ6UXV0 394 aa10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 CPEB2Q7Z5Q1 589 aaKnown RBP10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 PPIL6Q8IXY8 311 aa10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 OR51Q1Q8NH59 317 aa10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 MCOLN3Q8TDD5 553 aa10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 ALKBH8Q96BT7 664 aaKnown RBP10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 THAP11Q96EK4 314 aa10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 CCDC138Q96M89 665 aa10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 ATG10Q9H0Y0 220 aa10.91□□□□□ -0.66
HMGCS1-204ENST00000507293 MYO7BQ6PIF6 2116 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 KCNE1BA0A087WTH5 132 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 ARHGAP10A1A4S6 786 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 OR2W5A6NFC9 320 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 SGK494L7N484 410 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 PGRMC1O00264 195 aaKnown RBP10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 PRAMEF2O60811 474 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 RDH16O75452 317 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 RASAL1O95294 804 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 CYC1P08574 325 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 CDH1P12830 882 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 PGAM1P18669 254 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 MST1P26927 711 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 RGS4P49798 205 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 TIAL1Q01085 375 aaKnown RBP eCLIP10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 SP140Q13342 867 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 NAE1Q13564 534 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 CRYMQ14894 314 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 BTBD16Q32M84 506 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 RBM20Q5T481 1227 aaKnown RBP10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 FCRLBQ6BAA4 426 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 PLAG1Q6DJT9 500 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 AGTRAPQ6RW13 159 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 PAQR3Q6TCH7 311 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 ANKRD37Q7Z713 158 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 ASPGQ86U10 573 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 C17orf64Q86WR6 236 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 PDSS2Q86YH6 399 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 TICAM1Q8IUC6 712 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 SLC34A3Q8N130 599 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 MYO1HQ8N1T3 1032 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 KCT2Q8NC54 265 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 CAMKVQ8NCB2 501 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 C2CD4AQ8NCU7 369 aaPredicted RBP10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 SUN3Q8TAQ9 357 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 GRK7Q8WTQ7 553 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 EEF1AKMT1Q8WVE0 214 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 RELTQ969Z4 430 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 TM4SF19Q96DZ7 209 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 LINGO1Q96FE5 620 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 CYTH2Q99418 400 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 NAP1L3Q99457 506 aaPredicted RBP10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 RBCK1Q9BYM8 510 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 PCBD2Q9H0N5 130 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 ANKHQ9HCJ1 492 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 STMN3Q9NZ72 180 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 ABI3Q9P2A4 366 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 C19orf25Q9UFG5 118 aaPredicted RBP10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 TEKT2Q9UIF3 430 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 JRKLQ9Y4A0 524 aa10.9□□□□□ -0.66
HMGCS1-204ENST00000507293 TRGV8A0A0C4DH27 118 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 ZNF860A6NHJ4 632 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 ENO4A6NNW6 628 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 A8MUI8 341 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 PRSS44E7EML9 344 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 SLC16A5O15375 505 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 LCMT2O60294 686 aaKnown RBP10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 BANF1O75531 89 aa10.89□□□□□ -0.67
HMGCS1-204ENST00000507293 UNC5CO95185 931 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms