RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 PTCD3Q96EY7 689 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 PKNOX2Q96KN3 472 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 ERVK-6Q9BXR3 956 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 IQCGQ9H095 443 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 NT5DC2Q9H857 520 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 TMBIM4Q9HC24 238 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 COPG2Q9UBF2 871 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 MID2Q9UJV3 735 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 PCTPQ9UKL6 214 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 ANGPTL3Q9Y5C1 460 aa11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 MAP1BP46821 2468 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-208ENST00000504489 FEZF1A0PJY2 475 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 STMND1H3BQB6 276 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 AGPSO00116 658 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 TXNDC9O14530 226 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 GPR37O15354 613 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 ZSCAN9O15535 394 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 ZNF749O43361 778 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 TLX3O43711 291 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 LCMT2O60294 686 aaKnown RBP11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 CPNE3O75131 537 aaKnown RBP11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 SPAG7O75391 227 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 WFS1O76024 890 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 KIAA0754O94854 1291 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 DLGAP3O95886 979 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 CTSBP07858 339 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 CPA3P15088 417 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 ZNF28P17035 718 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 IMPDH1P20839 514 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 VARSP26640 1264 aaKnown RBP11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 AHRP35869 848 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 BCL6P41182 706 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 GCGRP47871 477 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 SCTRP47872 440 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 PCBP4P57723 403 aaKnown RBP11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 IRF8Q02556 426 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 CHIT1Q13231 466 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 LAPTM5Q13571 262 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 DOC2AQ14183 400 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 GRM7Q14831 915 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 PRTGQ2VWP7 1150 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 FAM214AQ32MH5 1076 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 XKR6Q5GH73 641 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 WASHC2DQ5SRD0 308 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 MANEAQ5SRI9 462 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 YOD1Q5VVQ6 348 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 GOLGA7Q7Z5G4 137 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 DTX1Q86Y01 620 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 KRT78Q8N1N4 520 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 ZNF655Q8N720 491 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 MFSD9Q8NBP5 474 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 ZNF740Q8NDX6 193 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 TCP10LQ8TDR4 215 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 ZNF483Q8TF39 744 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 RERGQ96A58 199 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 L3HYPDHQ96EM0 354 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 LRFN5Q96NI6 719 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 EFCAB11Q9BUY7 163 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 ULBP3Q9BZM4 244 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 SPNS1Q9H2V7 528 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 C12orf65Q9H3J6 166 aaKnown RBP11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 IPPKQ9H8X2 491 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 SYNPO2LQ9H987 977 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 ACTR5Q9H9F9 607 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 GEMIN8Q9NWZ8 242 aaKnown RBP11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 SRPK3Q9UPE1 567 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 DMXL2Q8TDJ6 3036 aa11.37□□□□□ -0.59
PDLIM5-208ENST00000504489 ANKRD11Q6UB99 2663 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 UQCRHLA0A096LP55 91 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 HYKKA2RU49 373 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 OR1F1O43749 312 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 UGDHO60701 494 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 NTRK1P04629 796 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 UQCRHP07919 91 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 CD22P20273 847 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 GSTM2P28161 218 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 ARSFP54793 590 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 DNAJB13P59910 316 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 NAA20P61599 178 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 MEF2AQ02078 507 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 SLBPQ14493 270 aaKnown RBP eCLIP11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 UNC50Q53HI1 259 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 PAGE2BQ5JRK9 111 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 ZNF678Q5SXM1 525 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 AGBL2Q5U5Z8 902 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 PRAMEF17Q5VTA0 474 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 GARNL3Q5VVW2 1013 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 LIPJQ5W064 366 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 RHBDD2Q6NTF9 364 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 C6orf15Q6UXA7 325 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 TMIGD1Q6UXZ0 262 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 TIPARPQ7Z3E1 657 aaKnown RBP11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 VN1R4Q7Z5H5 301 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 ZFAND4Q86XD8 727 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 CSNK1A1LQ8N752 337 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 CCDC63Q8NA47 563 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 TTC29Q8NA56 475 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 KDF1Q8NAX2 398 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 SLC38A9Q8NBW4 561 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 CAMKVQ8NCB2 501 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms