RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 RGS4P49798 205 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 ITGA8P53708 1063 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 GNG11P61952 73 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 FAM53BQ14153 422 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 HECTD2Q5U5R9 776 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 IRAK1BP1Q5VVH5 260 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 B3GNTL1Q67FW5 361 aaPredicted RBP15.4■□□□□ 0.06
SCLT1-204ENST00000503215 HIBCHQ6NVY1 386 aaPredicted RBP15.4■□□□□ 0.06
SCLT1-204ENST00000503215 TMEM207Q6UWW9 146 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 PCGF5Q86SE9 256 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 ANKMY2Q8IV38 441 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 SIRT6Q8N6T7 355 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 KCT2Q8NC54 265 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 BRIX1Q8TDN6 353 aaKnown RBP15.4■□□□□ 0.06
SCLT1-204ENST00000503215 OR4K3Q96R72 315 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 SGPP1Q9BX95 441 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 TRIM31Q9BZY9 425 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 PTGFRNQ9P2B2 879 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 ERRFI1Q9UJM3 462 aaPredicted RBP15.4■□□□□ 0.06
SCLT1-204ENST00000503215 MKL2Q9ULH7 1088 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 PYCARDQ9ULZ3 195 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 VWA7Q9Y334 891 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 PSAT1Q9Y617 370 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 TEX264Q9Y6I9 313 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 SVILO95425 2214 aa15.4■□□□□ 0.06
SCLT1-204ENST00000503215 KCNE1BA0A087WTH5 132 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 NSG1A0A0A6YYJ2 146 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 IGHV3-20A0A0C4DH32 117 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 A1L4Q6 167 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 SGK494L7N484 410 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 TXNDC9O14530 226 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 DNAJB6O75190 326 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 F10P00742 488 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 IL1RNP18510 177 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 FDXRP22570 491 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 DR1Q01658 176 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 MEF2AQ02078 507 aaPredicted RBP15.39■□□□□ 0.05
SCLT1-204ENST00000503215 MFAP5Q13361 173 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 FASTKD3Q14CZ7 662 aaKnown RBP15.39■□□□□ 0.05
SCLT1-204ENST00000503215 MORF4L2Q15014 288 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 PCOLCEQ15113 449 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 STEAP4Q687X5 459 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 TMEM214Q6NUQ4 689 aaKnown RBP15.39■□□□□ 0.05
SCLT1-204ENST00000503215 KIAA0408Q6ZU52 694 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 PDSS2Q86YH6 399 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 KBTBD2Q8IY47 623 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 MYO1HQ8N1T3 1032 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 ZCCHC10Q8TBK6 192 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 GRHL3Q8TE85 626 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 TM4SF19Q96DZ7 209 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 MOCOSQ96EN8 888 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 LMF1Q96S06 567 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 NAT9Q9BTE0 207 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 VN1R1Q9GZP7 353 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 C14orf105Q9NVL8 296 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 HCN3Q9P1Z3 774 aa15.39■□□□□ 0.05
SCLT1-204ENST00000503215 PLEKHB1Q9UF11 243 aaPredicted RBP15.39■□□□□ 0.05
SCLT1-204ENST00000503215 LOC102723996A0A087X1L8 192 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 A0A1W2PQ72 361 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 CTAGE15A4D2H0 777 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 ANKUB1A6NFN9 424 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 SLC16A5O15375 505 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 PRPF4O43172 522 aaKnown RBP eCLIP15.38■□□□□ 0.05
SCLT1-204ENST00000503215 PIAS1O75925 651 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 SERPINA7P05543 415 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 CXCR2P25025 360 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 SOX11P35716 441 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 IL2P60568 153 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 RPS15AP62244 130 aaKnown RBP15.38■□□□□ 0.05
SCLT1-204ENST00000503215 CDC16Q13042 620 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 SP140Q13342 867 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 ZNF169Q14929 603 aaPredicted RBP15.38■□□□□ 0.05
SCLT1-204ENST00000503215 NDUFA9Q16795 377 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 TMEM205Q6UW68 189 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 LANCL3Q6ZV70 420 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 GALNT7Q86SF2 657 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 CTAGE6Q86UF2 777 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 SLC26A11Q86WA9 606 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 C17orf64Q86WR6 236 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 PALM2Q8IXS6 379 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 PDIK1LQ8N165 341 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 ZNF740Q8NDX6 193 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 PCBD2Q9H0N5 130 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 SPNS1Q9H2V7 528 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 ARL15Q9NXU5 204 aa15.38■□□□□ 0.05
SCLT1-204ENST00000503215 E2F3O00716 465 aa15.37■□□□□ 0.05
SCLT1-204ENST00000503215 SEC31AO94979 1220 aaKnown RBP15.37■□□□□ 0.05
SCLT1-204ENST00000503215 GUCA1CO95843 209 aa15.37■□□□□ 0.05
SCLT1-204ENST00000503215 B3GALT4O96024 378 aa15.37■□□□□ 0.05
SCLT1-204ENST00000503215 ITGAMP11215 1152 aa15.37■□□□□ 0.05
SCLT1-204ENST00000503215 HRH2P25021 359 aa15.37■□□□□ 0.05
SCLT1-204ENST00000503215 TSFMP43897 325 aaKnown RBP15.37■□□□□ 0.05
SCLT1-204ENST00000503215 AVPR1BP47901 424 aa15.37■□□□□ 0.05
SCLT1-204ENST00000503215 SRSF11Q05519 484 aaKnown RBP15.37■□□□□ 0.05
SCLT1-204ENST00000503215 PDAP1Q13442 181 aaKnown RBP15.37■□□□□ 0.05
SCLT1-204ENST00000503215 ZNF460Q14592 562 aa15.37■□□□□ 0.05
SCLT1-204ENST00000503215 LRRC8EQ6NSJ5 796 aa15.37■□□□□ 0.05
SCLT1-204ENST00000503215 LCTLQ6UWM7 567 aa15.37■□□□□ 0.05
SCLT1-204ENST00000503215 ASPGQ86U10 573 aa15.37■□□□□ 0.05
SCLT1-204ENST00000503215 OR56A3Q8NH54 315 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms